Experiment: M9+sucrose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS03365 and HER17_RS03370 are separated by 82 nucleotides HER17_RS03370 and HER17_RS03375 are separated by 54 nucleotides HER17_RS03375 and HER17_RS03380 are separated by 14 nucleotides HER17_RS03380 and HER17_RS03385 are separated by 22 nucleotides
HER17_RS03365: HER17_RS03365 - protein YacL, at 767,388 to 767,747
_RS03365
HER17_RS03370: HER17_RS03370 - fructose-6-phosphate aldolase, at 767,830 to 768,495
_RS03370
HER17_RS03375: HER17_RS03375 - PTS ascorbate transporter subunit IIC, at 768,550 to 769,809
_RS03375
HER17_RS03380: HER17_RS03380 - PTS sugar transporter subunit IIB, at 769,824 to 770,111
_RS03380
HER17_RS03385: HER17_RS03385 - PTS sugar transporter subunit IIA, at 770,134 to 770,577
_RS03385
Position (kb) 768
769
770 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 767.661 kb on + strand, within HER17_RS03365 at 767.661 kb on + strand, within HER17_RS03365 at 767.661 kb on + strand, within HER17_RS03365 at 767.662 kb on - strand, within HER17_RS03365 at 767.664 kb on + strand, within HER17_RS03365 at 767.664 kb on + strand, within HER17_RS03365 at 767.724 kb on + strand at 767.725 kb on - strand at 768.008 kb on - strand, within HER17_RS03370 at 768.104 kb on + strand, within HER17_RS03370 at 768.105 kb on - strand, within HER17_RS03370 at 768.112 kb on + strand, within HER17_RS03370 at 768.114 kb on + strand, within HER17_RS03370 at 768.115 kb on - strand, within HER17_RS03370 at 768.115 kb on - strand, within HER17_RS03370 at 768.115 kb on - strand, within HER17_RS03370 at 768.115 kb on - strand, within HER17_RS03370 at 768.115 kb on - strand, within HER17_RS03370 at 768.116 kb on + strand, within HER17_RS03370 at 768.116 kb on + strand, within HER17_RS03370 at 768.116 kb on + strand, within HER17_RS03370 at 768.117 kb on - strand, within HER17_RS03370 at 768.117 kb on - strand, within HER17_RS03370 at 768.140 kb on + strand, within HER17_RS03370 at 768.141 kb on - strand, within HER17_RS03370 at 768.141 kb on - strand, within HER17_RS03370 at 768.141 kb on - strand, within HER17_RS03370 at 768.162 kb on - strand, within HER17_RS03370 at 768.162 kb on - strand, within HER17_RS03370 at 768.163 kb on + strand, within HER17_RS03370 at 768.164 kb on - strand, within HER17_RS03370 at 768.164 kb on - strand, within HER17_RS03370 at 768.186 kb on + strand, within HER17_RS03370 at 768.375 kb on + strand, within HER17_RS03370 at 768.377 kb on + strand, within HER17_RS03370 at 768.378 kb on - strand, within HER17_RS03370 at 768.378 kb on - strand, within HER17_RS03370 at 768.467 kb on - strand at 768.481 kb on + strand at 768.481 kb on + strand at 768.481 kb on + strand at 768.481 kb on + strand at 768.482 kb on - strand at 768.485 kb on + strand at 768.486 kb on - strand at 768.508 kb on + strand at 768.508 kb on + strand at 768.551 kb on + strand at 768.552 kb on - strand at 768.667 kb on - strand at 768.804 kb on - strand, within HER17_RS03375 at 768.898 kb on + strand, within HER17_RS03375 at 768.898 kb on + strand, within HER17_RS03375 at 768.898 kb on + strand, within HER17_RS03375 at 768.899 kb on - strand, within HER17_RS03375 at 768.910 kb on - strand, within HER17_RS03375 at 768.993 kb on + strand, within HER17_RS03375 at 768.995 kb on + strand, within HER17_RS03375 at 768.995 kb on + strand, within HER17_RS03375 at 768.995 kb on + strand, within HER17_RS03375 at 768.995 kb on + strand, within HER17_RS03375 at 768.996 kb on - strand, within HER17_RS03375 at 769.014 kb on + strand, within HER17_RS03375 at 769.014 kb on + strand, within HER17_RS03375 at 769.125 kb on + strand, within HER17_RS03375 at 769.174 kb on + strand, within HER17_RS03375 at 769.174 kb on + strand, within HER17_RS03375 at 769.174 kb on + strand, within HER17_RS03375 at 769.203 kb on + strand, within HER17_RS03375 at 769.299 kb on + strand, within HER17_RS03375 at 769.300 kb on - strand, within HER17_RS03375 at 769.301 kb on + strand, within HER17_RS03375 at 769.301 kb on + strand, within HER17_RS03375 at 769.301 kb on + strand, within HER17_RS03375 at 769.301 kb on + strand, within HER17_RS03375 at 769.302 kb on - strand, within HER17_RS03375 at 769.302 kb on - strand, within HER17_RS03375 at 769.423 kb on - strand, within HER17_RS03375 at 769.423 kb on - strand, within HER17_RS03375 at 769.455 kb on - strand, within HER17_RS03375 at 769.468 kb on - strand, within HER17_RS03375 at 769.489 kb on - strand, within HER17_RS03375 at 769.489 kb on - strand, within HER17_RS03375 at 769.825 kb on + strand at 769.825 kb on + strand at 769.825 kb on + strand at 769.825 kb on + strand at 769.825 kb on + strand at 769.825 kb on + strand at 769.826 kb on - strand at 769.826 kb on - strand at 769.826 kb on - strand at 769.826 kb on - strand at 769.826 kb on - strand at 769.827 kb on + strand at 769.828 kb on - strand at 769.828 kb on - strand at 769.828 kb on - strand at 769.828 kb on - strand at 769.956 kb on - strand, within HER17_RS03380 at 769.995 kb on + strand, within HER17_RS03380 at 769.996 kb on - strand, within HER17_RS03380 at 769.996 kb on - strand, within HER17_RS03380 at 770.048 kb on + strand, within HER17_RS03380 at 770.076 kb on - strand, within HER17_RS03380 at 770.094 kb on + strand at 770.102 kb on + strand at 770.135 kb on + strand at 770.135 kb on + strand at 770.135 kb on + strand at 770.136 kb on - strand at 770.148 kb on + strand at 770.167 kb on + strand at 770.167 kb on + strand at 770.167 kb on + strand at 770.167 kb on + strand at 770.167 kb on + strand at 770.167 kb on + strand at 770.168 kb on - strand at 770.168 kb on - strand at 770.168 kb on - strand at 770.168 kb on - strand at 770.185 kb on + strand, within HER17_RS03385 at 770.235 kb on + strand, within HER17_RS03385 at 770.236 kb on - strand, within HER17_RS03385 at 770.236 kb on - strand, within HER17_RS03385 at 770.238 kb on + strand, within HER17_RS03385 at 770.250 kb on + strand, within HER17_RS03385 at 770.250 kb on + strand, within HER17_RS03385 at 770.281 kb on + strand, within HER17_RS03385 at 770.281 kb on + strand, within HER17_RS03385 at 770.282 kb on - strand, within HER17_RS03385 at 770.282 kb on - strand, within HER17_RS03385 at 770.411 kb on + strand, within HER17_RS03385 at 770.411 kb on + strand, within HER17_RS03385 at 770.411 kb on + strand, within HER17_RS03385 at 770.411 kb on + strand, within HER17_RS03385 at 770.411 kb on + strand, within HER17_RS03385 at 770.411 kb on + strand, within HER17_RS03385 at 770.411 kb on + strand, within HER17_RS03385 at 770.411 kb on + strand, within HER17_RS03385 at 770.412 kb on - strand, within HER17_RS03385 at 770.412 kb on - strand, within HER17_RS03385 at 770.412 kb on - strand, within HER17_RS03385 at 770.412 kb on - strand, within HER17_RS03385 at 770.412 kb on - strand, within HER17_RS03385 at 770.412 kb on - strand, within HER17_RS03385 at 770.412 kb on - strand, within HER17_RS03385 at 770.412 kb on - strand, within HER17_RS03385 at 770.412 kb on - strand, within HER17_RS03385 at 770.414 kb on + strand, within HER17_RS03385 at 770.414 kb on + strand, within HER17_RS03385 at 770.414 kb on + strand, within HER17_RS03385 at 770.415 kb on - strand, within HER17_RS03385 at 770.441 kb on + strand, within HER17_RS03385 at 770.442 kb on - strand, within HER17_RS03385 at 770.442 kb on - strand, within HER17_RS03385 at 770.456 kb on + strand, within HER17_RS03385 at 770.456 kb on + strand, within HER17_RS03385 at 770.456 kb on + strand, within HER17_RS03385 at 770.457 kb on - strand, within HER17_RS03385 at 770.457 kb on - strand, within HER17_RS03385 at 770.457 kb on - strand, within HER17_RS03385 at 770.493 kb on + strand, within HER17_RS03385 at 770.493 kb on + strand, within HER17_RS03385 at 770.579 kb on - strand at 770.611 kb on + strand at 770.612 kb on - strand at 770.695 kb on + strand at 770.695 kb on + strand at 770.695 kb on + strand at 770.714 kb on - strand at 770.714 kb on - strand at 770.714 kb on - strand at 770.744 kb on + strand at 770.744 kb on + strand at 770.745 kb on - strand at 770.745 kb on - strand at 770.745 kb on - strand at 770.745 kb on - strand at 770.745 kb on - strand at 770.745 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+sucrose remove 767,661 + HER17_RS03365 0.76 +1.0 767,661 + HER17_RS03365 0.76 -1.2 767,661 + HER17_RS03365 0.76 -0.4 767,662 - HER17_RS03365 0.76 -0.4 767,664 + HER17_RS03365 0.77 +0.1 767,664 + HER17_RS03365 0.77 +0.2 767,724 + -0.4 767,725 - +0.4 768,008 - HER17_RS03370 0.27 +0.0 768,104 + HER17_RS03370 0.41 -0.4 768,105 - HER17_RS03370 0.41 +0.2 768,112 + HER17_RS03370 0.42 -0.1 768,114 + HER17_RS03370 0.43 -0.0 768,115 - HER17_RS03370 0.43 +0.1 768,115 - HER17_RS03370 0.43 -0.1 768,115 - HER17_RS03370 0.43 -0.4 768,115 - HER17_RS03370 0.43 +0.5 768,115 - HER17_RS03370 0.43 -0.4 768,116 + HER17_RS03370 0.43 +0.6 768,116 + HER17_RS03370 0.43 +1.0 768,116 + HER17_RS03370 0.43 +1.1 768,117 - HER17_RS03370 0.43 -0.2 768,117 - HER17_RS03370 0.43 +0.6 768,140 + HER17_RS03370 0.47 +0.2 768,141 - HER17_RS03370 0.47 -0.6 768,141 - HER17_RS03370 0.47 +0.4 768,141 - HER17_RS03370 0.47 -0.3 768,162 - HER17_RS03370 0.50 -0.3 768,162 - HER17_RS03370 0.50 +0.6 768,163 + HER17_RS03370 0.50 +0.6 768,164 - HER17_RS03370 0.50 -0.4 768,164 - HER17_RS03370 0.50 +0.3 768,186 + HER17_RS03370 0.53 -0.9 768,375 + HER17_RS03370 0.82 -1.2 768,377 + HER17_RS03370 0.82 +0.8 768,378 - HER17_RS03370 0.82 -0.1 768,378 - HER17_RS03370 0.82 +0.1 768,467 - -0.6 768,481 + -0.1 768,481 + -0.1 768,481 + +0.3 768,481 + -1.6 768,482 - +0.4 768,485 + +0.4 768,486 - -0.2 768,508 + +0.6 768,508 + -0.7 768,551 + +0.2 768,552 - -1.5 768,667 - +0.9 768,804 - HER17_RS03375 0.20 +0.3 768,898 + HER17_RS03375 0.28 -0.7 768,898 + HER17_RS03375 0.28 +0.6 768,898 + HER17_RS03375 0.28 -0.1 768,899 - HER17_RS03375 0.28 -0.6 768,910 - HER17_RS03375 0.29 -0.7 768,993 + HER17_RS03375 0.35 -1.0 768,995 + HER17_RS03375 0.35 +0.6 768,995 + HER17_RS03375 0.35 +1.1 768,995 + HER17_RS03375 0.35 +0.3 768,995 + HER17_RS03375 0.35 -2.3 768,996 - HER17_RS03375 0.35 +0.7 769,014 + HER17_RS03375 0.37 +0.8 769,014 + HER17_RS03375 0.37 +0.3 769,125 + HER17_RS03375 0.46 +0.7 769,174 + HER17_RS03375 0.50 +0.5 769,174 + HER17_RS03375 0.50 -0.6 769,174 + HER17_RS03375 0.50 +0.1 769,203 + HER17_RS03375 0.52 +0.3 769,299 + HER17_RS03375 0.59 +0.6 769,300 - HER17_RS03375 0.60 -0.7 769,301 + HER17_RS03375 0.60 +0.3 769,301 + HER17_RS03375 0.60 -1.2 769,301 + HER17_RS03375 0.60 +1.1 769,301 + HER17_RS03375 0.60 -0.9 769,302 - HER17_RS03375 0.60 +0.7 769,302 - HER17_RS03375 0.60 +0.5 769,423 - HER17_RS03375 0.69 -0.7 769,423 - HER17_RS03375 0.69 -0.7 769,455 - HER17_RS03375 0.72 +0.9 769,468 - HER17_RS03375 0.73 +0.5 769,489 - HER17_RS03375 0.75 +0.0 769,489 - HER17_RS03375 0.75 -0.5 769,825 + -0.4 769,825 + -0.2 769,825 + -0.1 769,825 + -0.3 769,825 + -1.3 769,825 + +0.8 769,826 - -0.4 769,826 - -1.1 769,826 - -0.2 769,826 - -1.2 769,826 - +0.6 769,827 + +1.0 769,828 - +0.1 769,828 - -0.5 769,828 - -0.3 769,828 - +0.2 769,956 - HER17_RS03380 0.46 -0.7 769,995 + HER17_RS03380 0.59 -0.5 769,996 - HER17_RS03380 0.60 +0.5 769,996 - HER17_RS03380 0.60 -0.9 770,048 + HER17_RS03380 0.78 +0.2 770,076 - HER17_RS03380 0.88 +0.6 770,094 + +2.8 770,102 + +0.8 770,135 + -0.2 770,135 + -1.1 770,135 + +0.4 770,136 - -0.2 770,148 + +0.6 770,167 + -0.4 770,167 + -0.5 770,167 + -0.4 770,167 + +1.0 770,167 + +0.1 770,167 + +1.0 770,168 - +0.7 770,168 - +0.9 770,168 - -0.0 770,168 - +0.1 770,185 + HER17_RS03385 0.11 +0.1 770,235 + HER17_RS03385 0.23 +0.0 770,236 - HER17_RS03385 0.23 -0.6 770,236 - HER17_RS03385 0.23 +0.1 770,238 + HER17_RS03385 0.23 +0.4 770,250 + HER17_RS03385 0.26 -0.1 770,250 + HER17_RS03385 0.26 +2.2 770,281 + HER17_RS03385 0.33 -1.2 770,281 + HER17_RS03385 0.33 +0.3 770,282 - HER17_RS03385 0.33 +0.5 770,282 - HER17_RS03385 0.33 +0.6 770,411 + HER17_RS03385 0.62 +0.8 770,411 + HER17_RS03385 0.62 -0.5 770,411 + HER17_RS03385 0.62 +0.6 770,411 + HER17_RS03385 0.62 +0.1 770,411 + HER17_RS03385 0.62 +0.6 770,411 + HER17_RS03385 0.62 -1.2 770,411 + HER17_RS03385 0.62 +0.2 770,411 + HER17_RS03385 0.62 -0.5 770,412 - HER17_RS03385 0.63 +1.3 770,412 - HER17_RS03385 0.63 +1.6 770,412 - HER17_RS03385 0.63 +0.3 770,412 - HER17_RS03385 0.63 -0.3 770,412 - HER17_RS03385 0.63 +0.3 770,412 - HER17_RS03385 0.63 -0.4 770,412 - HER17_RS03385 0.63 -0.2 770,412 - HER17_RS03385 0.63 +0.3 770,412 - HER17_RS03385 0.63 -0.4 770,414 + HER17_RS03385 0.63 +0.3 770,414 + HER17_RS03385 0.63 +0.8 770,414 + HER17_RS03385 0.63 +0.2 770,415 - HER17_RS03385 0.63 -0.2 770,441 + HER17_RS03385 0.69 +0.1 770,442 - HER17_RS03385 0.69 +0.1 770,442 - HER17_RS03385 0.69 +0.9 770,456 + HER17_RS03385 0.73 -0.0 770,456 + HER17_RS03385 0.73 -0.7 770,456 + HER17_RS03385 0.73 -0.8 770,457 - HER17_RS03385 0.73 +0.4 770,457 - HER17_RS03385 0.73 +1.4 770,457 - HER17_RS03385 0.73 +0.3 770,493 + HER17_RS03385 0.81 +0.4 770,493 + HER17_RS03385 0.81 +0.1 770,579 - -0.2 770,611 + -0.5 770,612 - -0.0 770,695 + +0.3 770,695 + -0.4 770,695 + -0.2 770,714 - +2.3 770,714 - +0.3 770,714 - +1.0 770,744 + +0.8 770,744 + +0.0 770,745 - +1.3 770,745 - +0.3 770,745 - +0.0 770,745 - +0.8 770,745 - -1.6 770,745 - -0.3
Or see this region's nucleotide sequence