Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS03185

Experiment: M9+sucrose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHER17_RS03180 and HER17_RS03185 are separated by 68 nucleotidesHER17_RS03185 and HER17_RS03190 are separated by 104 nucleotides HER17_RS03180: HER17_RS03180 - cell division protein FtsA, at 719,327 to 720,583 _RS03180 HER17_RS03185: HER17_RS03185 - cell division protein FtsZ, at 720,652 to 721,803 _RS03185 HER17_RS03190: HER17_RS03190 - UDP-3-O-acyl-N-acetylglucosamine deacetylase, at 721,908 to 722,825 _RS03190 Position (kb) 720 721 722Strain fitness (log2 ratio) -1 0 1at 720.628 kb on + strandat 721.817 kb on - strandat 722.798 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9+sucrose
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720,628 + -0.1
721,817 - +0.3
722,798 + +0.6

Or see this region's nucleotide sequence