Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS21710

Experiment: M9+sucrose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+sucrose
4,865,151	+		HER17_RS21705	0.32	-0.0
4,865,321	+		HER17_RS21705	0.46	+0.7
4,865,327	+		HER17_RS21705	0.47	-0.2
4,865,327	+		HER17_RS21705	0.47	+0.2
4,865,328	-		HER17_RS21705	0.47	+0.3
4,865,385	+		HER17_RS21705	0.52	-1.5
4,865,581	-		HER17_RS21705	0.68	-0.0
4,865,621	+		HER17_RS21705	0.72	-0.3
4,865,621	+		HER17_RS21705	0.72	-0.0
4,865,622	-		HER17_RS21705	0.72	+1.6
4,865,645	-		HER17_RS21705	0.74	-0.4
4,865,674	+		HER17_RS21705	0.76	+0.8
4,865,792	-		HER17_RS21705	0.86	+0.0
4,865,843	+				-1.1
4,865,843	+				+0.2
4,865,843	+				+1.5
4,865,843	+				-0.3
4,865,844	-				-1.4
4,865,844	-				+0.4
4,865,844	-				+0.1
4,865,844	-				+0.2
4,865,935	+				+0.5
4,865,935	+				-0.3
4,865,957	+				-0.9
4,865,970	+				+0.1
4,865,994	+				+0.3
4,865,995	-				+0.0
4,865,995	-				-0.1
4,866,021	-				+0.2
4,866,021	-				-0.2
4,866,021	-				+0.1
4,866,045	+				+1.3
4,866,045	+				+0.4
4,866,063	+				-0.1
4,866,064	-				+0.4
4,866,068	+				-0.5
4,866,068	+				+0.2
4,866,068	+				-1.1
4,866,069	-				+0.1
4,866,091	+				-0.1
4,866,101	+				-0.1
4,866,102	-				+0.8
4,866,103	+				+0.4
4,866,103	+				+0.3
4,866,107	-				-0.6
4,866,107	-				+0.9
4,866,107	-				-0.6
4,866,144	-				-0.1
4,866,144	-				-0.8
4,866,156	+				+0.5
4,866,157	-				-0.5
4,866,157	-				+0.6
4,866,157	-				-1.3
4,866,157	-				+0.6
4,866,157	-				-0.0
4,866,184	+		HER17_RS21710	0.16	-0.6
4,866,189	+		HER17_RS21710	0.17	+0.1
4,866,189	+		HER17_RS21710	0.17	+0.1
4,866,190	-		HER17_RS21710	0.18	-0.6
4,866,190	-		HER17_RS21710	0.18	-0.2
4,866,249	+		HER17_RS21710	0.33	+1.5
4,866,249	+		HER17_RS21710	0.33	+0.3
4,866,249	+		HER17_RS21710	0.33	+0.4
4,866,249	+		HER17_RS21710	0.33	-0.3
4,866,249	+		HER17_RS21710	0.33	+0.2
4,866,250	-		HER17_RS21710	0.33	+0.4
4,866,250	-		HER17_RS21710	0.33	+0.6
4,866,250	-		HER17_RS21710	0.33	+0.1
4,866,250	-		HER17_RS21710	0.33	+0.2
4,866,262	-		HER17_RS21710	0.36	-0.7
4,866,289	-		HER17_RS21710	0.43	+0.6
4,866,339	-		HER17_RS21710	0.56	-0.3
4,866,350	-		HER17_RS21710	0.59	+0.1
4,866,369	-		HER17_RS21710	0.64	+0.5
4,866,476	-				-1.3
4,866,476	-				+0.2
4,866,509	-				+1.0
4,866,525	+				+0.4
4,866,527	+				+0.8
4,866,527	+				-0.7
4,866,527	+				+0.4
4,866,528	-				+0.2
4,866,533	+				+0.0
4,866,533	+				-0.0
4,866,533	+				+0.5
4,866,538	+				-0.5
4,866,538	+				+0.1
4,866,539	-				-0.2
4,866,539	-				-2.3
4,866,539	-				+0.3
4,866,542	+				-0.2
4,866,542	+				-0.4
4,866,542	+				+0.4
4,866,542	+				-1.1
4,866,543	-				-0.3
4,866,543	-				+0.1
4,866,543	-				-0.3
4,866,543	-				+0.1
4,866,543	-				-1.0
4,866,549	+				-0.3
4,866,549	+				-0.2
4,866,549	+				+0.8
4,866,549	+				-0.1
4,866,549	+				-0.3
4,866,549	+				-0.4
4,866,550	-				+1.5
4,866,550	-				+0.1
4,866,550	-				-0.5
4,866,550	-				-0.1
4,866,550	-				-1.3
4,866,550	-				-0.5
4,866,551	+				-1.0
4,866,551	+				-2.0
4,866,551	+				+0.5
4,866,551	+				-0.0
4,866,552	-				-0.5
4,866,556	+				-0.6
4,866,557	-				-0.0
4,866,557	-				-0.0
4,866,570	+				-0.2
4,866,571	-				+0.7
4,866,597	+				+0.1
4,866,598	-				+1.1
4,866,599	+				-0.3
4,866,599	+				-0.7
4,866,599	+				+0.1
4,866,599	+				+0.3
4,866,599	+				+0.1
4,866,599	+				-0.6
4,866,599	+				-0.1
4,866,599	+				-0.6
4,866,600	-				-0.1
4,866,600	-				-1.0
4,866,600	-				+0.2
4,866,617	+				-2.0
4,866,617	+				-1.6
4,866,617	+				+0.2
4,866,618	-				-0.2
4,866,618	-				+1.3
4,866,621	+				-0.6
4,866,621	+				+0.8
4,866,622	-				+0.1
4,866,622	-				+1.6
4,866,622	-				+0.2
4,866,622	-				+0.2
4,866,622	-				-1.5
4,866,649	+				+0.3
4,866,684	-				+1.8
4,866,684	-				+0.1
4,866,684	-				-0.3
4,866,685	+				-0.8
4,866,685	+				+2.1
4,866,686	-				+0.5
4,866,686	-				+0.1
4,866,716	+				+0.4
4,866,716	+				-0.4
4,866,743	+				-0.0
4,866,751	+				-0.7
4,866,760	-				+0.1
4,866,804	-		HER17_RS21715	0.16	+0.5
4,866,811	+		HER17_RS21715	0.17	+0.5
4,866,811	+		HER17_RS21715	0.17	+0.4
4,866,811	+		HER17_RS21715	0.17	-1.9
4,866,811	+		HER17_RS21715	0.17	-0.0
4,866,811	+		HER17_RS21715	0.17	-0.4
4,866,811	+		HER17_RS21715	0.17	+0.4
4,866,812	-		HER17_RS21715	0.17	+0.1
4,866,812	-		HER17_RS21715	0.17	+0.3
4,866,812	-		HER17_RS21715	0.17	+0.1
4,866,813	+		HER17_RS21715	0.17	-0.2
4,866,813	+		HER17_RS21715	0.17	-1.4
4,866,813	+		HER17_RS21715	0.17	+0.5
4,866,813	+		HER17_RS21715	0.17	-0.6
4,866,813	+		HER17_RS21715	0.17	+0.2
4,866,814	-		HER17_RS21715	0.17	+0.5
4,866,814	-		HER17_RS21715	0.17	-0.0
4,866,886	-		HER17_RS21715	0.28	-0.5
4,866,886	-		HER17_RS21715	0.28	+0.0
4,866,886	-		HER17_RS21715	0.28	+0.6
4,866,886	-		HER17_RS21715	0.28	+0.1
4,866,908	+		HER17_RS21715	0.32	+0.1
4,866,953	+		HER17_RS21715	0.38	+0.4
4,866,953	+		HER17_RS21715	0.38	-0.9
4,866,954	-		HER17_RS21715	0.38	-0.9
4,866,963	+		HER17_RS21715	0.40	+0.1
4,866,973	+		HER17_RS21715	0.41	+0.6
4,866,973	+		HER17_RS21715	0.41	-0.4
4,866,973	+		HER17_RS21715	0.41	-0.2
4,866,973	+		HER17_RS21715	0.41	+0.9
4,866,974	-		HER17_RS21715	0.42	-0.8
4,866,974	-		HER17_RS21715	0.42	-0.6
4,866,974	-		HER17_RS21715	0.42	+0.5
4,866,974	-		HER17_RS21715	0.42	-1.1
4,866,976	-		HER17_RS21715	0.42	+0.7
4,866,976	-		HER17_RS21715	0.42	-0.2
4,866,976	-		HER17_RS21715	0.42	-0.6
4,866,976	-		HER17_RS21715	0.42	-1.3
4,867,033	-		HER17_RS21715	0.50	-1.1
4,867,109	+		HER17_RS21715	0.62	+0.3
4,867,109	+		HER17_RS21715	0.62	+0.7
4,867,174	+		HER17_RS21715	0.72	+0.0
4,867,176	+		HER17_RS21715	0.72	-0.7
4,867,177	-		HER17_RS21715	0.72	+0.4
4,867,185	-		HER17_RS21715	0.73	-0.1
4,867,230	+		HER17_RS21715	0.80	+0.1
4,867,230	+		HER17_RS21715	0.80	+0.4
4,867,230	+		HER17_RS21715	0.80	+0.4
4,867,230	+		HER17_RS21715	0.80	-0.1
4,867,231	-		HER17_RS21715	0.80	+0.2
4,867,279	-		HER17_RS21715	0.88	-1.2
4,867,279	-		HER17_RS21715	0.88	+0.2
4,867,344	+				+1.1
4,867,350	+				-0.1
4,867,350	+				-1.9
4,867,350	+				+1.1
4,867,350	+				+0.2
4,867,351	-				-0.8
4,867,351	-				+0.8
4,867,360	+				+0.6
4,867,360	+				-0.1
4,867,360	+				-0.8
4,867,360	+				-2.0
4,867,360	+				-0.3
4,867,360	+				-0.6
4,867,361	-				+0.4
4,867,361	-				+0.5
4,867,361	-				+0.4
4,867,363	+				+0.2
4,867,363	+				+0.1
4,867,364	-				+0.9
4,867,364	-				+1.7
4,867,364	-				-0.5
4,867,436	-				+1.5
4,867,439	+				-0.3
4,867,439	+				+0.6
4,867,439	+				+0.5
4,867,439	+				+0.3
4,867,440	-				-1.0
4,867,440	-				-0.8
4,867,440	-				+0.8
4,867,440	-				-0.9
4,867,473	-				+0.1
4,867,480	+				-0.9
4,867,480	+				-0.4
4,867,481	-				-0.8
4,867,485	+				+2.1
4,867,485	+				+0.4
4,867,485	+				-1.7
4,867,485	+				-0.8
4,867,485	+				+0.3
4,867,486	-				+0.4
4,867,486	-				+0.4
4,867,486	-				+0.1
4,867,491	+				-1.0
4,867,492	-				+0.1
4,867,492	-				-0.3
4,867,493	+				+2.1
4,867,493	+				-0.3
4,867,493	+				+0.5
4,867,493	+				+1.6
4,867,494	-				-0.8
4,867,494	-				-0.2
4,867,494	-				+1.7
4,867,497	-				+0.6
4,867,497	-				+2.1
4,867,498	+				-1.6
4,867,498	+				+0.2
4,867,498	+				+0.7
4,867,498	+				-0.3
4,867,498	+				+0.1
4,867,499	-				+0.2
4,867,499	-				+2.6
4,867,502	+				-0.1
4,867,502	+				+1.1
4,867,502	+				+0.5
4,867,502	+				+0.4
4,867,502	+				+0.3
4,867,503	-				+0.2
4,867,503	-				+0.1
4,867,503	-				+0.2
4,867,503	-				-0.4
4,867,506	+				-1.2
4,867,507	-				-0.6