Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS21340

Experiment: M9+sucrose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+sucrose
4,780,138	-		HER17_RS21335	0.53	-0.7
4,780,236	+		HER17_RS21335	0.59	-1.3
4,780,237	-		HER17_RS21335	0.59	+0.0
4,780,491	+		HER17_RS21335	0.76	+0.0
4,780,512	-		HER17_RS21335	0.78	+0.5
4,780,519	-		HER17_RS21335	0.78	-0.2
4,780,533	+		HER17_RS21335	0.79	-1.4
4,780,718	+				+0.8
4,780,718	+				+0.0
4,780,719	-				+0.8
4,780,722	+				-0.6
4,780,723	-				-1.0
4,780,772	+				-0.1
4,780,772	+				+0.3
4,780,772	+				-0.3
4,780,772	+				+0.0
4,780,772	+				-1.9
4,780,772	+				-2.0
4,780,773	-				+1.3
4,780,777	+				-1.0
4,780,777	+				-1.1
4,780,778	-				+1.3
4,780,778	-				+0.3
4,780,781	-				-1.9
4,780,781	-				-1.6
4,780,781	-				-0.4
4,780,817	+				-0.5
4,780,818	-				+1.1
4,780,821	-				+0.8
4,780,843	+				-0.6
4,780,844	-				-0.3
4,780,864	+				+0.4
4,780,921	+				-0.5
4,780,939	+				+0.4
4,780,939	+				+0.0
4,780,939	+				-0.2
4,780,940	-				+0.5
4,780,940	-				+0.3
4,780,940	-				-0.5
4,780,940	-				-0.2
4,781,008	-				+0.3
4,781,013	-				+0.9
4,781,052	+				+0.1
4,781,052	+				+1.0
4,781,052	+				+0.8
4,781,052	+				+0.5
4,781,052	+				+0.3
4,781,052	+				-0.0
4,781,214	+				-0.6
4,781,214	+				+0.6
4,781,215	-				-0.6
4,781,215	-				-0.9
4,781,281	+		HER17_RS21340	0.13	-0.4
4,781,281	+		HER17_RS21340	0.13	+0.4
4,781,287	+		HER17_RS21340	0.13	+0.5
4,781,288	-		HER17_RS21340	0.13	-0.4
4,781,288	-		HER17_RS21340	0.13	-0.1
4,781,291	+		HER17_RS21340	0.14	-0.1
4,781,291	+		HER17_RS21340	0.14	+1.0
4,781,291	+		HER17_RS21340	0.14	+0.5
4,781,291	+		HER17_RS21340	0.14	+0.3
4,781,291	+		HER17_RS21340	0.14	-0.0
4,781,291	+		HER17_RS21340	0.14	-0.2
4,781,291	+		HER17_RS21340	0.14	-0.3
4,781,291	+		HER17_RS21340	0.14	-0.3
4,781,291	+		HER17_RS21340	0.14	+0.1
4,781,291	+		HER17_RS21340	0.14	+0.4
4,781,291	+		HER17_RS21340	0.14	-0.2
4,781,291	+		HER17_RS21340	0.14	+0.5
4,781,291	+		HER17_RS21340	0.14	+0.2
4,781,291	+		HER17_RS21340	0.14	-0.6
4,781,292	-		HER17_RS21340	0.14	+0.3
4,781,292	-		HER17_RS21340	0.14	-0.4
4,781,292	-		HER17_RS21340	0.14	+0.1
4,781,292	-		HER17_RS21340	0.14	-0.7
4,781,292	-		HER17_RS21340	0.14	+0.4
4,781,292	-		HER17_RS21340	0.14	+2.3
4,781,292	-		HER17_RS21340	0.14	+0.0
4,781,292	-		HER17_RS21340	0.14	+1.1
4,781,354	+		HER17_RS21340	0.19	+2.0
4,781,355	-		HER17_RS21340	0.19	-0.7
4,781,418	+		HER17_RS21340	0.24	-0.7
4,781,418	+		HER17_RS21340	0.24	-0.4
4,781,427	+		HER17_RS21340	0.25	-0.5
4,781,427	+		HER17_RS21340	0.25	-1.7
4,781,428	-		HER17_RS21340	0.25	-1.9
4,781,559	+		HER17_RS21340	0.36	-1.6
4,781,560	-		HER17_RS21340	0.36	-0.2
4,781,560	-		HER17_RS21340	0.36	-0.2
4,781,710	+		HER17_RS21340	0.49	+0.3
4,781,739	+		HER17_RS21340	0.51	-0.2
4,781,739	+		HER17_RS21340	0.51	+0.5
4,781,740	-		HER17_RS21340	0.51	-1.1
4,781,740	-		HER17_RS21340	0.51	-0.1
4,781,740	-		HER17_RS21340	0.51	+0.4
4,781,864	+		HER17_RS21340	0.61	-0.3
4,781,865	-		HER17_RS21340	0.61	-0.3
4,782,216	-				+0.4
4,782,240	+				+0.6
4,782,240	+				+0.5
4,782,241	-				+0.3
4,782,241	-				+0.2
4,782,260	+				-0.2
4,782,262	+				-0.3
4,782,262	+				-0.3
4,782,263	-				+0.5
4,782,263	-				+0.2
4,782,318	+				+0.5
4,782,329	+				+0.6
4,782,329	+				+0.8
4,782,329	+				+1.3
4,782,329	+				-0.7
4,782,333	+				-0.0
4,782,336	-				-0.2
4,782,336	-				+0.1
4,782,346	+				-0.1
4,782,346	+				-0.4
4,782,374	+				-0.3
4,782,374	+				+0.6
4,782,374	+				-0.2
4,782,410	+				+1.4
4,782,410	+				+0.5
4,782,410	+				-0.5
4,782,410	+				+0.3
4,782,410	+				+0.4
4,782,411	-				+1.1
4,782,411	-				+0.6
4,782,491	+				+0.3
4,782,491	+				+0.1
4,782,491	+				-0.9
4,782,492	-				+0.8
4,782,492	-				-2.2
4,782,522	+				+0.3
4,782,522	+				-0.2
4,782,523	-				-0.0
4,782,523	-				-0.0
4,782,523	-				+0.6
4,782,523	-				-0.9
4,782,527	+				-0.1
4,782,527	+				+0.4
4,782,528	-				-0.4
4,782,528	-				-0.1
4,782,550	-				-0.6
4,782,567	+				-0.6
4,782,567	+				+0.1
4,782,666	+		HER17_RS21345	0.12	-0.4
4,782,666	+		HER17_RS21345	0.12	+1.0
4,782,666	+		HER17_RS21345	0.12	-0.7
4,782,666	+		HER17_RS21345	0.12	-0.3
4,782,667	-		HER17_RS21345	0.12	-0.0
4,782,667	-		HER17_RS21345	0.12	+1.1
4,782,720	+		HER17_RS21345	0.18	-0.0
4,782,726	+		HER17_RS21345	0.18	+0.5
4,782,726	+		HER17_RS21345	0.18	+0.4
4,782,726	+		HER17_RS21345	0.18	+0.8
4,782,726	+		HER17_RS21345	0.18	+0.1
4,782,726	+		HER17_RS21345	0.18	-0.9
4,782,727	-		HER17_RS21345	0.18	-0.6
4,782,727	-		HER17_RS21345	0.18	-0.3
4,782,727	-		HER17_RS21345	0.18	+0.2
4,782,741	+		HER17_RS21345	0.20	-0.2
4,782,742	-		HER17_RS21345	0.20	+0.7
4,782,793	+		HER17_RS21345	0.25	+1.2
4,782,794	-		HER17_RS21345	0.25	-0.5
4,782,799	+		HER17_RS21345	0.26	+0.2
4,782,800	-		HER17_RS21345	0.26	+0.4
4,782,818	+		HER17_RS21345	0.28	+0.0
4,782,908	+		HER17_RS21345	0.37	+0.3
4,782,909	-		HER17_RS21345	0.38	+0.5
4,782,969	+		HER17_RS21345	0.44	-0.2
4,782,970	-		HER17_RS21345	0.44	-0.4
4,782,970	-		HER17_RS21345	0.44	-0.0
4,782,970	-		HER17_RS21345	0.44	-1.0
4,782,970	-		HER17_RS21345	0.44	+0.4
4,783,008	-		HER17_RS21345	0.48	-0.1
4,783,076	+		HER17_RS21345	0.55	-0.3
4,783,130	+		HER17_RS21345	0.61	+0.8
4,783,130	+		HER17_RS21345	0.61	+0.1
4,783,201	+		HER17_RS21345	0.68	-0.4
4,783,302	-		HER17_RS21345	0.79	-1.0
4,783,307	-		HER17_RS21345	0.79	+0.3