Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS21115

Experiment: M9+sucrose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+sucrose
4,723,980	+				-0.2
4,723,998	-				-1.3
4,724,025	+				-1.3
4,724,688	+				-0.4
4,724,717	+				-0.3
4,724,717	+				+1.1
4,724,718	-				+0.2
4,724,779	-				+1.1
4,724,812	-				+0.5
4,724,825	-				+1.0
4,724,839	+				-0.7
4,724,840	-				-0.7
4,724,840	-				-1.0
4,724,840	-				+0.5
4,724,840	-				-0.6
4,724,840	-				+0.0
4,724,840	-				-0.9
4,724,874	-				+0.0
4,724,902	+				+0.3
4,724,949	-				+0.9
4,724,949	-				-0.2
4,724,953	+				-0.7
4,724,955	+				+1.0
4,724,956	-				+0.3
4,724,956	-				-0.7
4,724,956	-				+0.8
4,724,956	-				-0.6
4,724,956	-				-0.4
4,725,074	+				-0.2
4,725,074	+				+0.1
4,725,126	-				+0.7
4,725,150	+				-0.0
4,725,150	+				-0.1
4,725,177	+		HER17_RS21115	0.11	+0.3
4,725,177	+		HER17_RS21115	0.11	-0.4
4,725,178	-		HER17_RS21115	0.11	+0.3
4,725,284	-		HER17_RS21115	0.17	-0.1
4,725,313	-		HER17_RS21115	0.18	-0.0
4,725,329	+		HER17_RS21115	0.19	-0.2
4,725,330	-		HER17_RS21115	0.19	+0.4
4,725,335	+		HER17_RS21115	0.19	+0.7
4,725,338	+		HER17_RS21115	0.19	-0.8
4,725,338	+		HER17_RS21115	0.19	+0.5
4,725,339	-		HER17_RS21115	0.19	+0.8
4,725,424	+		HER17_RS21115	0.24	+0.7
4,725,458	-		HER17_RS21115	0.26	+0.7
4,725,461	-		HER17_RS21115	0.26	-0.8
4,725,498	+		HER17_RS21115	0.28	-0.2
4,725,517	+		HER17_RS21115	0.29	+0.7
4,725,517	+		HER17_RS21115	0.29	+0.9
4,725,517	+		HER17_RS21115	0.29	-1.5
4,725,518	-		HER17_RS21115	0.29	-0.3
4,725,518	-		HER17_RS21115	0.29	+0.3
4,725,525	-		HER17_RS21115	0.29	-0.7
4,725,525	-		HER17_RS21115	0.29	-0.3
4,725,594	+		HER17_RS21115	0.33	-1.0
4,725,646	+		HER17_RS21115	0.36	-0.6
4,725,647	-		HER17_RS21115	0.36	-0.4
4,725,657	+		HER17_RS21115	0.36	+0.3
4,725,657	+		HER17_RS21115	0.36	-0.7
4,725,657	+		HER17_RS21115	0.36	-0.5
4,725,657	+		HER17_RS21115	0.36	-0.4
4,725,658	-		HER17_RS21115	0.36	+0.4
4,725,678	+		HER17_RS21115	0.37	-0.2
4,725,678	+		HER17_RS21115	0.37	+0.3
4,725,678	+		HER17_RS21115	0.37	-0.2
4,725,679	-		HER17_RS21115	0.37	-0.0
4,725,679	-		HER17_RS21115	0.37	-0.2
4,725,679	-		HER17_RS21115	0.37	-0.5
4,725,680	+		HER17_RS21115	0.38	+0.8
4,725,681	-		HER17_RS21115	0.38	+1.2
4,725,690	+		HER17_RS21115	0.38	+0.6
4,725,755	+		HER17_RS21115	0.41	+1.1
4,725,756	-		HER17_RS21115	0.42	+0.5
4,725,768	-		HER17_RS21115	0.42	+1.4
4,725,778	+		HER17_RS21115	0.43	+0.6
4,725,779	-		HER17_RS21115	0.43	-0.4
4,725,779	-		HER17_RS21115	0.43	+0.3
4,725,839	+		HER17_RS21115	0.46	+0.4
4,725,839	+		HER17_RS21115	0.46	+0.0
4,725,840	-		HER17_RS21115	0.46	-0.1
4,725,845	-		HER17_RS21115	0.46	+1.0
4,726,028	+		HER17_RS21115	0.56	+1.3
4,726,028	+		HER17_RS21115	0.56	-1.4
4,726,029	-		HER17_RS21115	0.56	-1.0
4,726,029	-		HER17_RS21115	0.56	+0.4
4,726,029	-		HER17_RS21115	0.56	-0.1
4,726,029	-		HER17_RS21115	0.56	-0.2
4,726,115	+		HER17_RS21115	0.60	+0.4
4,726,268	+		HER17_RS21115	0.69	-1.0
4,726,307	+		HER17_RS21115	0.71	+0.7
4,726,307	+		HER17_RS21115	0.71	+0.1
4,726,307	+		HER17_RS21115	0.71	+0.8
4,726,308	-		HER17_RS21115	0.71	-0.3
4,726,566	-		HER17_RS21115	0.84	-0.6
4,726,578	-		HER17_RS21115	0.85	-0.6
4,726,860	+				-0.1
4,726,860	+				+0.5
4,726,861	-				-0.3
4,726,861	-				-0.4
4,726,863	+				+0.5
4,726,863	+				+0.5
4,726,928	+				+0.0
4,726,998	+				+0.0
4,727,273	+		HER17_RS21120	0.86	-1.0
4,727,274	-		HER17_RS21120	0.86	-0.1
4,727,332	-				-0.7
4,727,336	+				-0.5
4,727,336	+				+0.1
4,727,336	+				+0.9
4,727,336	+				+0.3
4,727,336	+				+0.2
4,727,336	+				+0.0
4,727,336	+				+1.8
4,727,336	+				-0.1
4,727,337	-				+0.1
4,727,337	-				-0.1
4,727,337	-				-0.2
4,727,337	-				+0.4
4,727,337	-				+0.5
4,727,337	-				-1.0
4,727,337	-				+0.2
4,727,337	-				+0.4
4,727,337	-				-0.3
4,727,337	-				+0.4
4,727,337	-				+1.0
4,727,337	-				-0.1
4,727,337	-				-0.2
4,727,337	-				-0.6
4,727,338	+				+0.2
4,727,338	+				-0.3
4,727,338	+				+0.1
4,727,339	-				-0.3
4,727,339	-				+0.6
4,727,341	-				+2.1
4,727,352	-				+1.4
4,727,368	+				+0.4
4,727,368	+				+0.4
4,727,368	+				-0.4
4,727,368	+				-0.2
4,727,368	+				-0.0
4,727,368	+				+0.4
4,727,368	+				+1.1
4,727,368	+				+0.1
4,727,368	+				+0.6
4,727,368	+				+0.1
4,727,368	+				-0.5
4,727,369	-				-0.6
4,727,369	-				-0.4
4,727,369	-				-0.3
4,727,369	-				-0.2
4,727,369	-				+0.5
4,727,369	-				+0.0
4,727,369	-				+0.5
4,727,369	-				-0.4
4,727,369	-				+0.3
4,727,369	-				-0.4
4,727,369	-				-0.9
4,727,373	+				-0.7
4,727,373	+				+0.9
4,727,373	+				+1.3
4,727,373	+				+1.1
4,727,374	-				-0.0
4,727,374	-				+0.1
4,727,374	-				-0.2
4,727,374	-				+0.8
4,727,375	+				-0.1
4,727,375	+				-0.3
4,727,375	+				-0.2
4,727,376	-				-0.3
4,727,376	-				+0.2
4,727,376	-				-0.3
4,727,376	-				+0.7
4,727,376	-				+0.0
4,727,381	-				-0.6
4,727,381	-				-0.2
4,727,453	+				+1.0
4,727,453	+				-0.7
4,727,492	+				-0.9
4,727,492	+				-0.3
4,727,492	+				+0.2
4,727,492	+				-0.2
4,727,493	-				-0.4
4,727,494	+				+0.1
4,727,494	+				+0.5
4,727,494	+				+0.6
4,727,495	-				+0.4
4,727,520	+				+0.3
4,727,520	+				+0.7
4,727,521	-				+0.8
4,727,539	+				+1.0
4,727,540	-				-0.5
4,727,634	-		HER17_RS21125	0.16	+1.1
4,727,688	-		HER17_RS21125	0.26	+0.3
4,727,744	+		HER17_RS21125	0.35	-0.7
4,727,745	-		HER17_RS21125	0.35	-0.3
4,727,752	+		HER17_RS21125	0.37	-0.3
4,727,812	+		HER17_RS21125	0.47	+0.5
4,727,813	-		HER17_RS21125	0.47	-0.7
4,727,843	-		HER17_RS21125	0.52	+0.0