Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17830

Experiment: M9+glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glucose
4,022,999	-		HER17_RS17820	0.48	-1.1
4,023,004	-		HER17_RS17820	0.49	-0.0
4,023,078	+		HER17_RS17820	0.66	+0.4
4,023,099	-		HER17_RS17820	0.71	+0.0
4,023,163	+		HER17_RS17820	0.85	-1.0
4,023,163	+		HER17_RS17820	0.85	+0.3
4,023,284	+				-1.2
4,023,285	-				+1.0
4,023,290	+				-0.0
4,023,329	+				-0.5
4,023,329	+				+1.9
4,023,329	+				-2.2
4,023,329	+				-2.3
4,023,343	-				-0.9
4,023,343	-				+0.6
4,023,375	+				+1.0
4,023,376	-				+0.5
4,023,376	-				+1.0
4,023,427	-				-1.3
4,023,428	+				-0.8
4,023,430	+				-0.2
4,023,431	-				+0.1
4,023,431	-				-0.2
4,023,468	+				-1.3
4,023,481	+		HER17_RS17825	0.14	-0.1
4,023,485	+		HER17_RS17825	0.15	-0.4
4,023,485	+		HER17_RS17825	0.15	-1.2
4,023,486	-		HER17_RS17825	0.16	-0.0
4,023,486	-		HER17_RS17825	0.16	+0.2
4,023,506	+		HER17_RS17825	0.23	-1.2
4,023,507	-		HER17_RS17825	0.23	-0.1
4,023,512	-		HER17_RS17825	0.25	+0.3
4,023,527	+		HER17_RS17825	0.30	+0.2
4,023,551	-		HER17_RS17825	0.38	-1.7
4,023,551	-		HER17_RS17825	0.38	+0.7
4,023,551	-		HER17_RS17825	0.38	+0.9
4,023,554	-		HER17_RS17825	0.39	+0.7
4,023,558	+		HER17_RS17825	0.41	+0.2
4,023,559	-		HER17_RS17825	0.41	-3.4
4,023,559	-		HER17_RS17825	0.41	+0.8
4,023,578	+		HER17_RS17825	0.47	+0.5
4,023,578	+		HER17_RS17825	0.47	-0.7
4,023,578	+		HER17_RS17825	0.47	+1.7
4,023,579	-		HER17_RS17825	0.48	-2.0
4,023,610	+		HER17_RS17825	0.58	-0.2
4,023,616	+		HER17_RS17825	0.60	-0.2
4,023,617	-		HER17_RS17825	0.61	-0.8
4,023,617	-		HER17_RS17825	0.61	-0.8
4,023,620	+		HER17_RS17825	0.62	-3.6
4,023,620	+		HER17_RS17825	0.62	+0.7
4,023,621	-		HER17_RS17825	0.62	+2.4
4,023,630	+		HER17_RS17825	0.65	+0.2
4,023,631	-		HER17_RS17825	0.66	+0.1
4,023,631	-		HER17_RS17825	0.66	-0.9
4,023,631	-		HER17_RS17825	0.66	+0.1
4,023,654	+		HER17_RS17825	0.74	+0.9
4,023,655	-		HER17_RS17825	0.74	+0.4
4,023,655	-		HER17_RS17825	0.74	-2.2
4,023,658	+		HER17_RS17825	0.75	+1.3
4,023,658	+		HER17_RS17825	0.75	-0.7
4,023,659	-		HER17_RS17825	0.75	+0.6
4,023,660	+		HER17_RS17825	0.76	-0.6
4,023,660	+		HER17_RS17825	0.76	+1.8
4,023,736	+				+1.5
4,023,737	-				+0.8
4,023,746	-				+0.6
4,023,839	+				+1.3
4,023,839	+				+0.1
4,023,840	-				+0.9
4,023,843	+				-1.3
4,023,843	+				+0.1
4,023,843	+				-0.6
4,023,845	+				-1.8
4,023,894	-				+0.4
4,023,914	+				-0.0
4,023,914	+				-1.3
4,023,916	+				+0.6
4,023,916	+				+1.2
4,023,916	+				+0.7
4,023,916	+				+1.6
4,023,916	+				+0.3
4,023,916	+				-1.5
4,023,917	-				+0.8
4,023,917	-				-1.1
4,023,917	-				+0.5
4,023,931	-				-0.8
4,023,937	+				+1.7
4,023,937	+				+0.7
4,023,938	-				+1.2
4,023,938	-				-1.3
4,023,962	-				-1.5
4,023,962	-				+0.1
4,023,962	-				+1.5
4,023,963	+				-0.3
4,023,965	+				+2.5
4,023,965	+				+2.0
4,023,965	+				-0.3
4,023,965	+				-0.1
4,023,966	-				+0.2
4,023,966	-				+1.3
4,023,975	+				-0.6
4,024,034	+		HER17_RS17830	0.13	-0.8
4,024,034	+		HER17_RS17830	0.13	-0.8
4,024,043	+		HER17_RS17830	0.15	+0.5
4,024,044	-		HER17_RS17830	0.15	+1.8
4,024,057	+		HER17_RS17830	0.17	+1.0
4,024,058	-		HER17_RS17830	0.18	+2.2
4,024,100	+		HER17_RS17830	0.25	+0.9
4,024,127	-		HER17_RS17830	0.30	+0.8
4,024,150	-		HER17_RS17830	0.34	-0.5
4,024,243	+		HER17_RS17830	0.51	-0.2
4,024,243	+		HER17_RS17830	0.51	+0.5
4,024,244	-		HER17_RS17830	0.51	+0.6
4,024,244	-		HER17_RS17830	0.51	-0.1
4,024,244	-		HER17_RS17830	0.51	+0.2
4,024,250	+		HER17_RS17830	0.52	-0.8
4,024,250	+		HER17_RS17830	0.52	-1.2
4,024,251	-		HER17_RS17830	0.52	+0.9
4,024,315	+		HER17_RS17830	0.64	-0.4
4,024,316	-		HER17_RS17830	0.64	+1.1
4,024,328	-		HER17_RS17830	0.66	-2.3
4,024,328	-		HER17_RS17830	0.66	-0.3
4,024,370	+		HER17_RS17830	0.73	-0.6
4,024,394	+		HER17_RS17830	0.78	-0.2
4,024,423	-		HER17_RS17830	0.83	+1.1
4,024,506	+				-0.9
4,024,511	+				-0.1
4,024,521	+				+0.5
4,024,521	+				-0.9
4,024,521	+				+0.0
4,024,521	+				+0.6
4,024,522	-				-0.9
4,024,524	-				-0.7
4,024,524	-				+2.6
4,024,540	-				-2.7
4,024,586	+				+0.0
4,024,587	-				+1.3
4,024,587	-				+0.3
4,024,724	-				+0.3
4,024,725	+				+0.5
4,024,725	+				-0.0
4,024,726	-				-0.3
4,024,726	-				+0.3
4,024,769	+				-0.1
4,024,770	-				-0.3
4,024,770	-				+1.7
4,024,834	-				-1.2
4,024,837	-				+1.1
4,024,938	-				-0.7
4,024,939	+				-0.1
4,024,940	-				+0.8
4,024,940	-				-1.3
4,024,940	-				+0.6
4,024,971	+				+0.3
4,024,987	-				+0.8
4,025,036	-				+0.7
4,025,046	+				+1.1
4,025,072	-				+0.7
4,025,074	+				+0.3
4,025,082	+				-2.8
4,025,094	+				+0.3
4,025,094	+				+1.4
4,025,097	+				+0.8
4,025,121	+				+0.6
4,025,165	+				+0.2
4,025,165	+				+0.9
4,025,165	+				-0.1
4,025,165	+				+1.7
4,025,165	+				+0.7
4,025,165	+				-0.4
4,025,205	+				+0.1
4,025,205	+				+0.7
4,025,206	-				+1.3
4,025,209	-				+0.6
4,025,258	+				-0.9
4,025,259	-				-0.1
4,025,259	-				+1.0
4,025,262	+				+1.9
4,025,262	+				+1.9
4,025,263	-				-1.9
4,025,263	-				-0.1
4,025,263	-				-1.0
4,025,263	-				+1.1
4,025,263	-				+0.0
4,025,284	+				+0.3
4,025,284	+				+1.1
4,025,291	+				+1.3
4,025,291	+				+1.1
4,025,291	+				-0.1
4,025,297	+				+0.3
4,025,315	+				+0.6
4,025,323	-				-1.3
4,025,333	+				-1.5
4,025,333	+				+0.1
4,025,365	+				-1.2
4,025,366	-				+0.6
4,025,381	+				-0.0
4,025,382	-				-1.3
4,025,387	-				-1.3
4,025,391	+				-0.5
4,025,391	+				-0.5
4,025,391	+				-2.2
4,025,391	+				+0.3
4,025,391	+				+0.4
4,025,391	+				-3.2
4,025,391	+				+0.1
4,025,391	+				+1.8
4,025,391	+				-0.7
4,025,391	+				+0.1
4,025,391	+				-0.4
4,025,391	+				-1.8
4,025,391	+				-0.8
4,025,391	+				-0.6
4,025,391	+				-0.0
4,025,391	+				-0.4
4,025,391	+				-0.8
4,025,391	+				+0.7
4,025,391	+				-0.6
4,025,391	+				+0.6
4,025,391	+				+0.0
4,025,391	+				-2.7
4,025,392	-				-0.2
4,025,392	-				-1.3
4,025,392	-				-0.1
4,025,392	-				-0.3
4,025,392	-				+0.7
4,025,392	-				+1.3
4,025,392	-				-1.6
4,025,392	-				+0.5
4,025,392	-				-1.1
4,025,392	-				+2.4
4,025,392	-				+2.1
4,025,392	-				+1.7
4,025,392	-				-0.8
4,025,392	-				-0.7
4,025,392	-				+1.6
4,025,392	-				+1.1
4,025,392	-				-1.9
4,025,392	-				+0.8
4,025,392	-				-0.0
4,025,392	-				-0.4
4,025,392	-				-1.3
4,025,446	+				-0.2