Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS06925

Experiment: M9+glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glucose
1,535,137	-				+1.3
1,535,147	+				+1.3
1,535,202	+				+0.1
1,535,202	+				+0.8
1,535,202	+				+0.6
1,535,203	-				-0.2
1,535,203	-				-0.3
1,535,203	-				-0.5
1,535,203	-				+0.6
1,535,204	+				+1.0
1,535,210	+				-0.0
1,535,211	-				+2.0
1,535,256	+				-0.0
1,535,256	+				-1.5
1,535,257	-				+0.7
1,535,257	-				-0.9
1,535,257	-				+0.9
1,535,257	-				-1.8
1,535,257	-				+1.5
1,535,295	+				-0.1
1,535,295	+				-0.3
1,535,296	-				+0.4
1,535,296	-				-0.7
1,535,296	-				+0.3
1,535,299	+				+0.5
1,535,320	+				-0.8
1,535,320	+				-1.1
1,535,320	+				-0.8
1,535,321	-				+0.1
1,535,321	-				+0.2
1,535,348	+				+1.7
1,535,348	+				+1.1
1,535,367	-				+0.7
1,535,370	+				-0.4
1,535,370	+				-1.0
1,535,370	+				+0.3
1,535,370	+				-0.7
1,535,370	+				+0.5
1,535,370	+				+1.4
1,535,371	-				+0.9
1,535,371	-				+0.1
1,535,371	-				+0.5
1,535,371	-				-1.2
1,535,375	+				-3.2
1,535,375	+				+1.7
1,535,375	+				-0.2
1,535,375	+				+1.1
1,535,379	+				-0.4
1,535,380	-				+2.2
1,535,380	-				-0.3
1,535,389	-				+1.5
1,535,428	+				-0.5
1,535,429	-				+1.1
1,535,429	-				-2.4
1,535,457	+				-0.5
1,535,638	+		HER17_RS06920	0.32	-1.5
1,535,638	+		HER17_RS06920	0.32	-1.6
1,535,742	-		HER17_RS06920	0.54	-0.9
1,535,745	+		HER17_RS06920	0.54	-0.8
1,535,745	+		HER17_RS06920	0.54	-1.3
1,535,746	-		HER17_RS06920	0.55	-1.2
1,535,746	-		HER17_RS06920	0.55	+0.3
1,535,749	+		HER17_RS06920	0.55	-1.5
1,535,749	+		HER17_RS06920	0.55	-1.3
1,535,749	+		HER17_RS06920	0.55	-0.9
1,535,749	+		HER17_RS06920	0.55	-1.1
1,535,750	-		HER17_RS06920	0.55	-2.1
1,535,750	-		HER17_RS06920	0.55	-0.1
1,535,750	-		HER17_RS06920	0.55	+2.4
1,535,752	+		HER17_RS06920	0.56	-0.5
1,535,807	+		HER17_RS06920	0.67	-0.3
1,535,808	-		HER17_RS06920	0.67	-0.9
1,535,821	+		HER17_RS06920	0.70	-1.1
1,535,837	+		HER17_RS06920	0.73	-1.2
1,535,838	-		HER17_RS06920	0.74	-0.9
1,535,966	-				-0.2
1,535,994	-				-1.0
1,536,010	-				+0.3
1,536,074	-				-1.9
1,536,180	+		HER17_RS06925	0.24	+0.6
1,536,187	-		HER17_RS06925	0.25	+0.5
1,536,295	+		HER17_RS06925	0.45	-1.9
1,536,295	+		HER17_RS06925	0.45	+1.3
1,536,295	+		HER17_RS06925	0.45	-0.1
1,536,350	+		HER17_RS06925	0.55	-1.6
1,536,350	+		HER17_RS06925	0.55	-2.0
1,536,374	+		HER17_RS06925	0.59	-1.3
1,536,374	+		HER17_RS06925	0.59	+0.3
1,536,374	+		HER17_RS06925	0.59	+1.7
1,536,374	+		HER17_RS06925	0.59	-0.3
1,536,374	+		HER17_RS06925	0.59	-1.2
1,536,375	-		HER17_RS06925	0.59	-0.9
1,536,425	+		HER17_RS06925	0.69	-0.3
1,536,469	+		HER17_RS06925	0.77	+1.0
1,536,505	-		HER17_RS06925	0.83	+0.8
1,536,506	+		HER17_RS06925	0.84	+1.1
1,536,506	+		HER17_RS06925	0.84	+0.7
1,536,506	+		HER17_RS06925	0.84	+1.3
1,536,506	+		HER17_RS06925	0.84	-0.6
1,536,506	+		HER17_RS06925	0.84	+1.2
1,536,506	+		HER17_RS06925	0.84	-1.5
1,536,506	+		HER17_RS06925	0.84	+0.7
1,536,506	+		HER17_RS06925	0.84	+0.3
1,536,506	+		HER17_RS06925	0.84	+0.3
1,536,507	-		HER17_RS06925	0.84	-3.0
1,536,507	-		HER17_RS06925	0.84	+0.3
1,536,507	-		HER17_RS06925	0.84	-1.0
1,536,507	-		HER17_RS06925	0.84	-0.9
1,536,507	-		HER17_RS06925	0.84	+1.2
1,536,507	-		HER17_RS06925	0.84	+1.4
1,536,507	-		HER17_RS06925	0.84	+0.2
1,536,507	-		HER17_RS06925	0.84	+1.1
1,536,510	+		HER17_RS06925	0.84	-0.1
1,536,559	+				+0.7
1,536,581	+				+0.7
1,536,582	-				-2.1
1,536,586	-				-1.2
1,536,588	+				-0.2
1,536,589	-				-0.9
1,536,629	+				-2.4
1,536,629	+				+1.3
1,536,630	-				-0.6
1,536,630	-				-0.3
1,536,656	-				-0.4
1,536,687	+				+0.2
1,536,689	+				-1.9
1,536,689	+				-2.6
1,536,689	+				+0.2
1,536,689	+				-2.2
1,536,690	-				+0.4
1,536,723	+				+1.1
1,536,723	+				-1.9
1,536,807	+				+0.1
1,536,808	-				-3.2
1,536,808	-				-3.2
1,536,820	-				-1.9
1,536,862	+		HER17_RS06930	0.10	-2.6
1,536,862	+		HER17_RS06930	0.10	+0.5
1,536,866	-		HER17_RS06930	0.11	+1.1
1,536,902	+		HER17_RS06930	0.15	-1.4
1,536,902	+		HER17_RS06930	0.15	+0.1
1,536,909	-		HER17_RS06930	0.15	-1.7
1,536,909	-		HER17_RS06930	0.15	-2.8
1,536,909	-		HER17_RS06930	0.15	-2.8
1,536,925	+		HER17_RS06930	0.17	+0.7
1,536,926	-		HER17_RS06930	0.17	-0.5
1,536,951	+		HER17_RS06930	0.20	-1.1
1,536,951	+		HER17_RS06930	0.20	-0.8
1,536,951	+		HER17_RS06930	0.20	-0.6
1,536,951	+		HER17_RS06930	0.20	-1.2
1,536,951	+		HER17_RS06930	0.20	-3.1
1,536,951	+		HER17_RS06930	0.20	-2.2
1,536,952	-		HER17_RS06930	0.20	-3.7
1,536,952	-		HER17_RS06930	0.20	-1.1
1,536,952	-		HER17_RS06930	0.20	-3.2
1,536,952	-		HER17_RS06930	0.20	-2.4
1,536,956	-		HER17_RS06930	0.20	-1.5
1,536,956	-		HER17_RS06930	0.20	-2.7
1,536,956	-		HER17_RS06930	0.20	-1.7
1,537,027	-		HER17_RS06930	0.28	-1.5
1,537,027	-		HER17_RS06930	0.28	-1.9
1,537,040	-		HER17_RS06930	0.29	-0.9
1,537,078	+		HER17_RS06930	0.33	-0.6
1,537,136	-		HER17_RS06930	0.40	+0.7
1,537,136	-		HER17_RS06930	0.40	+0.5
1,537,393	+		HER17_RS06930	0.67	-0.9
1,537,393	+		HER17_RS06930	0.67	+0.0
1,537,393	+		HER17_RS06930	0.67	+0.6
1,537,410	+		HER17_RS06930	0.69	-1.7
1,537,411	-		HER17_RS06930	0.69	-2.2