Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS18665

Experiment: M9+glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glucose
4,193,341	+		HER17_RS18660	0.52	+1.4
4,193,353	-		HER17_RS18660	0.52	+0.4
4,193,353	-		HER17_RS18660	0.52	-0.2
4,193,395	+		HER17_RS18660	0.56	+1.5
4,193,395	+		HER17_RS18660	0.56	-0.2
4,193,396	-		HER17_RS18660	0.56	+1.0
4,193,435	+		HER17_RS18660	0.59	+0.6
4,193,436	-		HER17_RS18660	0.59	-2.4
4,193,436	-		HER17_RS18660	0.59	+1.0
4,193,465	+		HER17_RS18660	0.61	-0.6
4,193,466	-		HER17_RS18660	0.61	+0.4
4,193,470	-		HER17_RS18660	0.61	+1.1
4,193,470	-		HER17_RS18660	0.61	-1.2
4,193,470	-		HER17_RS18660	0.61	-0.7
4,193,470	-		HER17_RS18660	0.61	-0.6
4,193,470	-		HER17_RS18660	0.61	-1.8
4,193,592	-		HER17_RS18660	0.71	-0.4
4,193,592	-		HER17_RS18660	0.71	-0.2
4,193,627	+		HER17_RS18660	0.73	+0.0
4,193,627	+		HER17_RS18660	0.73	+0.0
4,193,656	+		HER17_RS18660	0.75	-1.2
4,193,657	-		HER17_RS18660	0.75	-0.3
4,193,657	-		HER17_RS18660	0.75	+0.2
4,193,662	+		HER17_RS18660	0.76	-0.1
4,193,662	+		HER17_RS18660	0.76	-0.5
4,193,662	+		HER17_RS18660	0.76	+0.6
4,193,662	+		HER17_RS18660	0.76	+1.3
4,193,662	+		HER17_RS18660	0.76	+0.7
4,193,662	+		HER17_RS18660	0.76	+0.9
4,193,662	+		HER17_RS18660	0.76	+0.4
4,193,662	+		HER17_RS18660	0.76	+0.1
4,193,663	-		HER17_RS18660	0.76	-0.0
4,193,663	-		HER17_RS18660	0.76	-0.0
4,193,663	-		HER17_RS18660	0.76	+0.5
4,193,663	-		HER17_RS18660	0.76	+0.7
4,193,663	-		HER17_RS18660	0.76	+0.2
4,193,663	-		HER17_RS18660	0.76	-2.2
4,193,669	-		HER17_RS18660	0.76	+1.0
4,193,669	-		HER17_RS18660	0.76	-0.8
4,193,723	+		HER17_RS18660	0.80	-0.3
4,193,726	+		HER17_RS18660	0.81	-2.2
4,193,726	+		HER17_RS18660	0.81	+0.2
4,193,726	+		HER17_RS18660	0.81	+0.3
4,193,727	-		HER17_RS18660	0.81	+0.8
4,193,727	-		HER17_RS18660	0.81	+0.1
4,193,727	-		HER17_RS18660	0.81	+1.1
4,193,727	-		HER17_RS18660	0.81	+0.3
4,193,728	+		HER17_RS18660	0.81	+0.7
4,193,728	+		HER17_RS18660	0.81	+0.2
4,193,728	+		HER17_RS18660	0.81	+1.0
4,193,729	-		HER17_RS18660	0.81	+0.5
4,193,729	-		HER17_RS18660	0.81	-1.2
4,193,729	-		HER17_RS18660	0.81	+0.7
4,193,734	+		HER17_RS18660	0.81	+0.8
4,193,735	-		HER17_RS18660	0.81	+1.2
4,193,737	+		HER17_RS18660	0.81	+0.5
4,193,738	-		HER17_RS18660	0.82	+1.1
4,193,823	+		HER17_RS18660	0.88	-1.1
4,193,823	+		HER17_RS18660	0.88	+1.5
4,193,824	-		HER17_RS18660	0.88	-0.5
4,193,824	-		HER17_RS18660	0.88	+1.8
4,193,824	-		HER17_RS18660	0.88	-0.5
4,193,824	-		HER17_RS18660	0.88	-0.5
4,193,824	-		HER17_RS18660	0.88	+0.1
4,193,824	-		HER17_RS18660	0.88	-0.7
4,193,824	-		HER17_RS18660	0.88	+0.4
4,193,824	-		HER17_RS18660	0.88	-0.0
4,193,824	-		HER17_RS18660	0.88	-2.3
4,193,824	-		HER17_RS18660	0.88	+0.7
4,193,825	+		HER17_RS18660	0.88	+1.0
4,193,826	-		HER17_RS18660	0.88	+0.4
4,193,826	-		HER17_RS18660	0.88	+0.6
4,193,838	+		HER17_RS18660	0.89	+0.1
4,193,839	-		HER17_RS18660	0.89	-0.9
4,193,839	-		HER17_RS18660	0.89	-0.7
4,193,839	-		HER17_RS18660	0.89	-0.8
4,193,867	+				-0.6
4,193,867	+				-0.2
4,193,867	+				+0.1
4,193,867	+				+0.8
4,193,868	-				+0.1
4,193,868	-				-0.7
4,193,868	-				+0.3
4,193,868	-				+0.5
4,193,868	-				-1.2
4,193,905	+				+0.4
4,193,905	+				+0.4
4,193,905	+				+0.3
4,193,930	+				+0.9
4,193,930	+				+0.9
4,193,931	-				+1.6
4,193,931	-				-1.6
4,193,949	+				-0.5
4,193,949	+				+0.3
4,193,950	-				+0.0
4,193,975	+				+0.3
4,194,021	+				+0.6
4,194,022	-				-0.1
4,194,030	+				+1.0
4,194,030	+				-1.7
4,194,030	+				+0.7
4,194,031	-				+1.3
4,194,064	-				+0.5
4,194,064	-				+0.8
4,194,230	-				-0.4
4,194,269	+				-1.0
4,194,269	+				+2.0
4,194,269	+				+0.5
4,194,269	+				-0.6
4,194,270	-				+0.8
4,194,270	-				+1.1
4,194,270	-				+0.7
4,194,270	-				+0.3
4,194,272	+				+0.1
4,194,272	+				+0.7
4,194,272	+				-0.8
4,194,272	+				+0.2
4,194,273	-				-0.2
4,194,273	-				-0.5
4,194,273	-				+0.2
4,194,273	-				+0.7
4,194,273	-				+1.1
4,194,273	-				+0.5
4,194,273	-				+0.8
4,194,273	-				-0.2
4,194,273	-				+0.1
4,194,273	-				-0.1
4,194,291	-				+0.0
4,194,303	-				-0.8
4,194,307	+				+2.0
4,194,307	+				-2.4
4,194,307	+				+0.6
4,194,307	+				-0.4
4,194,307	+				-0.7
4,194,308	-				-0.5
4,194,312	-				+0.6
4,194,331	+				-0.2
4,194,331	+				-1.8
4,194,332	-				-1.0
4,194,332	-				+0.1
4,194,339	+				-1.1
4,194,339	+				+0.4
4,194,409	-		HER17_RS18665	0.15	+0.4
4,194,409	-		HER17_RS18665	0.15	+0.8
4,194,442	-		HER17_RS18665	0.21	-0.8
4,194,556	+		HER17_RS18665	0.45	-0.3
4,194,556	+		HER17_RS18665	0.45	+0.5
4,194,557	-		HER17_RS18665	0.45	+0.3
4,194,757	+		HER17_RS18665	0.86	+0.7
4,194,758	-		HER17_RS18665	0.86	+0.0
4,194,758	-		HER17_RS18665	0.86	+0.5
4,194,789	-				-1.0
4,194,789	-				+0.2
4,194,789	-				+1.0
4,194,814	+				+1.3
4,194,815	-				+1.6
4,194,826	+				-0.3
4,194,826	+				-0.1
4,194,827	-				+0.5
4,194,827	-				+1.3
4,194,831	+				+0.4
4,194,831	+				+0.5
4,194,831	+				+0.6
4,194,832	-				-1.0
4,194,874	+				-0.6
4,194,887	-				-1.2
4,194,887	-				+0.2
4,194,888	+				+0.7
4,194,889	-				+0.6
4,194,912	-				+0.3
4,194,912	-				-0.4
4,194,922	+				-0.1
4,194,923	-				+0.5
4,194,960	+				-0.3
4,195,002	-				+0.2
4,195,002	-				+0.2
4,195,015	-				-0.0
4,195,015	-				-0.4
4,195,030	+				-0.3
4,195,030	+				-1.2
4,195,031	-				-2.1
4,195,035	+				-1.2
4,195,036	-				+1.0
4,195,036	-				-2.9
4,195,051	+				+0.9
4,195,054	+				+0.0
4,195,054	+				+0.7
4,195,055	-				-2.8
4,195,055	-				-0.4
4,195,055	-				-0.8
4,195,057	+				-0.2
4,195,068	+				-1.3
4,195,069	-				+1.3
4,195,174	+		HER17_RS18670	0.35	+0.1
4,195,174	+		HER17_RS18670	0.35	+0.2
4,195,175	-		HER17_RS18670	0.35	+1.2
4,195,225	-		HER17_RS18670	0.52	-1.0
4,195,225	-		HER17_RS18670	0.52	-0.8
4,195,225	-		HER17_RS18670	0.52	-0.5
4,195,250	+		HER17_RS18670	0.61	-0.5
4,195,251	-		HER17_RS18670	0.61	-0.0
4,195,251	-		HER17_RS18670	0.61	+1.8
4,195,251	-		HER17_RS18670	0.61	+0.4
4,195,251	-		HER17_RS18670	0.61	+0.8
4,195,372	+				+0.9
4,195,398	+				+0.6
4,195,400	+				-0.1
4,195,401	-				-0.7
4,195,401	-				+0.3
4,195,401	-				-0.6
4,195,472	+				-0.0
4,195,503	+				-0.3
4,195,503	+				+0.6
4,195,526	-				-1.0
4,195,532	-				-1.0
4,195,546	-				+0.0
4,195,634	+				-0.0
4,195,752	+				+0.1
4,195,753	-				+0.1