Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17105

Experiment: M9+glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glucose
3,849,758	+				+0.1
3,849,803	+				-0.4
3,849,803	+				+0.8
3,849,803	+				+1.1
3,849,804	-				+0.8
3,849,804	-				+0.1
3,849,849	+		HER17_RS17100	0.13	+1.8
3,849,849	+		HER17_RS17100	0.13	-1.4
3,849,850	-		HER17_RS17100	0.13	-0.2
3,849,850	-		HER17_RS17100	0.13	-1.4
3,849,850	-		HER17_RS17100	0.13	-0.8
3,849,851	+		HER17_RS17100	0.13	+1.1
3,849,851	+		HER17_RS17100	0.13	+0.4
3,849,852	-		HER17_RS17100	0.13	+0.9
3,849,852	-		HER17_RS17100	0.13	+0.9
3,849,852	-		HER17_RS17100	0.13	-0.1
3,849,852	-		HER17_RS17100	0.13	+2.1
3,849,869	+		HER17_RS17100	0.16	+0.5
3,849,869	+		HER17_RS17100	0.16	-1.1
3,849,994	+		HER17_RS17100	0.32	-0.0
3,849,994	+		HER17_RS17100	0.32	-0.4
3,849,994	+		HER17_RS17100	0.32	-0.2
3,849,994	+		HER17_RS17100	0.32	+0.9
3,849,995	-		HER17_RS17100	0.32	-1.2
3,849,995	-		HER17_RS17100	0.32	-1.2
3,849,995	-		HER17_RS17100	0.32	+0.1
3,849,995	-		HER17_RS17100	0.32	-2.8
3,849,995	-		HER17_RS17100	0.32	+0.7
3,849,995	-		HER17_RS17100	0.32	-1.3
3,849,995	-		HER17_RS17100	0.32	-1.5
3,849,996	+		HER17_RS17100	0.32	-0.7
3,849,996	+		HER17_RS17100	0.32	+0.2
3,849,996	+		HER17_RS17100	0.32	-1.0
3,849,997	-		HER17_RS17100	0.32	+0.6
3,850,061	-		HER17_RS17100	0.40	+0.7
3,850,130	+		HER17_RS17100	0.49	+0.8
3,850,131	-		HER17_RS17100	0.49	-2.8
3,850,220	+		HER17_RS17100	0.61	+0.3
3,850,259	+		HER17_RS17100	0.66	-0.5
3,850,260	-		HER17_RS17100	0.66	+0.5
3,850,300	-		HER17_RS17100	0.71	-1.2
3,850,300	-		HER17_RS17100	0.71	-1.8
3,850,322	+		HER17_RS17100	0.74	+0.8
3,850,341	+		HER17_RS17100	0.76	-1.9
3,850,341	+		HER17_RS17100	0.76	+0.9
3,850,370	-		HER17_RS17100	0.80	-0.4
3,850,370	-		HER17_RS17100	0.80	-0.4
3,850,373	+		HER17_RS17100	0.80	+0.2
3,850,420	-		HER17_RS17100	0.86	-0.3
3,850,490	+				+0.0
3,850,490	+				+0.3
3,850,491	-				+1.6
3,850,518	+				-0.3
3,850,518	+				-0.1
3,850,518	+				+0.3
3,850,521	+				+0.8
3,850,522	-				+0.1
3,850,522	-				-2.6
3,850,522	-				+0.7
3,850,522	-				+0.6
3,850,558	+				+0.1
3,850,642	-				-0.2
3,850,642	-				+1.7
3,850,678	+				+0.6
3,850,678	+				+0.5
3,850,678	+				-0.1
3,850,678	+				+0.6
3,850,679	-				+0.1
3,850,679	-				+0.2
3,850,679	-				-0.5
3,850,723	-				-0.6
3,850,742	+				-0.2
3,850,742	+				+1.0
3,850,785	+				+2.0
3,850,855	+		HER17_RS17105	0.20	+1.3
3,850,856	-		HER17_RS17105	0.20	+1.1
3,850,893	-		HER17_RS17105	0.26	+0.2
3,850,937	+		HER17_RS17105	0.32	-1.7
3,850,938	-		HER17_RS17105	0.32	+2.1
3,851,236	+		HER17_RS17105	0.77	-1.4
3,851,237	-		HER17_RS17105	0.78	-0.9
3,851,326	+				+0.1
3,851,330	+				+0.0
3,851,367	+				+0.8
3,851,368	-				+0.7
3,851,396	+				-0.9
3,851,415	+				+1.0
3,851,416	-				+0.5
3,851,492	-		HER17_RS17110	0.15	+0.6
3,851,496	+		HER17_RS17110	0.16	+0.4
3,851,497	-		HER17_RS17110	0.16	-0.4
3,851,506	+		HER17_RS17110	0.18	+1.7
3,851,506	+		HER17_RS17110	0.18	-1.3
3,851,506	+		HER17_RS17110	0.18	-0.7
3,851,506	+		HER17_RS17110	0.18	-3.1
3,851,507	-		HER17_RS17110	0.18	-1.4
3,851,508	+		HER17_RS17110	0.18	+1.1
3,851,508	+		HER17_RS17110	0.18	-0.9
3,851,508	+		HER17_RS17110	0.18	-0.7
3,851,508	+		HER17_RS17110	0.18	-3.1
3,851,508	+		HER17_RS17110	0.18	+0.7
3,851,508	+		HER17_RS17110	0.18	-0.1
3,851,508	+		HER17_RS17110	0.18	-1.3
3,851,509	-		HER17_RS17110	0.18	+0.6
3,851,509	-		HER17_RS17110	0.18	+0.4
3,851,509	-		HER17_RS17110	0.18	-1.5
3,851,509	-		HER17_RS17110	0.18	+0.1
3,851,509	-		HER17_RS17110	0.18	-2.4
3,851,509	-		HER17_RS17110	0.18	+0.7
3,851,509	-		HER17_RS17110	0.18	+2.2
3,851,509	-		HER17_RS17110	0.18	-1.0
3,851,509	-		HER17_RS17110	0.18	-0.0
3,851,513	+		HER17_RS17110	0.19	+1.1
3,851,521	-		HER17_RS17110	0.21	+1.6
3,851,617	+		HER17_RS17110	0.41	-1.5
3,851,650	+		HER17_RS17110	0.49	-0.0
3,851,651	-		HER17_RS17110	0.49	-0.4
3,851,712	+		HER17_RS17110	0.62	+1.5
3,851,713	-		HER17_RS17110	0.62	-0.9
3,851,719	+		HER17_RS17110	0.63	+0.7
3,851,719	+		HER17_RS17110	0.63	+0.5
3,851,720	-		HER17_RS17110	0.63	-0.2
3,851,749	+		HER17_RS17110	0.70	-2.8
3,851,749	+		HER17_RS17110	0.70	-1.1
3,851,749	+		HER17_RS17110	0.70	+2.2
3,851,749	+		HER17_RS17110	0.70	+0.7
3,851,750	-		HER17_RS17110	0.70	+0.4
3,851,750	-		HER17_RS17110	0.70	+0.8
3,851,750	-		HER17_RS17110	0.70	+2.8
3,851,750	-		HER17_RS17110	0.70	-0.4
3,851,750	-		HER17_RS17110	0.70	+1.1
3,851,750	-		HER17_RS17110	0.70	-0.2
3,851,782	+		HER17_RS17110	0.77	-2.2
3,851,829	-		HER17_RS17110	0.87	+0.8
3,851,851	-				-3.1
3,851,851	-				-1.0
3,851,865	-				-1.8
3,851,865	-				-0.3
3,851,890	+				-0.5
3,851,890	+				+2.0
3,851,890	+				-0.1
3,851,891	-				+0.9
3,851,904	+				-0.5
3,851,905	-				+0.2
3,851,958	+				+0.6
3,851,958	+				-0.1
3,851,993	-				+1.2
3,852,031	+				+0.6
3,852,031	+				-0.0
3,852,054	+				-0.5
3,852,054	+				+0.8
3,852,055	-				-0.1
3,852,055	-				-0.8
3,852,055	-				-1.0
3,852,061	+				-0.2
3,852,061	+				+0.3
3,852,062	-				+0.7
3,852,062	-				+1.3
3,852,062	-				-1.0
3,852,065	+				-0.0
3,852,065	+				+0.6
3,852,065	+				+1.4
3,852,065	+				-3.5
3,852,065	+				+0.5
3,852,065	+				+0.8
3,852,066	-				+0.3
3,852,077	-				-1.5
3,852,077	-				+1.6
3,852,153	+				+0.5
3,852,154	-				+0.7
3,852,154	-				-0.5
3,852,154	-				-0.5
3,852,278	+		HER17_RS17115	0.24	+0.5
3,852,279	-		HER17_RS17115	0.24	+1.8