Experiment: M9+glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS04385 and HER17_RS04390 are separated by 382 nucleotides HER17_RS04390 and HER17_RS04395 are separated by 142 nucleotides HER17_RS04395 and HER17_RS04400 are separated by 239 nucleotides
HER17_RS04385: HER17_RS04385 - D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase, at 998,426 to 998,989
_RS04385
HER17_RS04390: HER17_RS04390 - 16S ribosomal RNA, at 999,372 to 1,000,917
_RS04390
HER17_RS04395: HER17_RS04395 - tRNA-Glu, at 1,001,060 to 1,001,132
_RS04395
HER17_RS04400: HER17_RS04400 - 23S ribosomal RNA, at 1,001,372 to 1,004,285
_RS04400
Position (kb) 999
1000
1001 Strain fitness (log2 ratio) -2
-1
0
1
2 at 998.392 kb on + strand at 998.404 kb on + strand at 998.489 kb on + strand, within HER17_RS04385 at 998.490 kb on - strand, within HER17_RS04385 at 998.490 kb on - strand, within HER17_RS04385 at 998.518 kb on + strand, within HER17_RS04385 at 998.629 kb on + strand, within HER17_RS04385 at 998.629 kb on + strand, within HER17_RS04385 at 998.693 kb on + strand, within HER17_RS04385 at 998.806 kb on + strand, within HER17_RS04385 at 998.806 kb on + strand, within HER17_RS04385 at 998.806 kb on + strand, within HER17_RS04385 at 998.806 kb on + strand, within HER17_RS04385 at 998.819 kb on + strand, within HER17_RS04385 at 998.819 kb on + strand, within HER17_RS04385 at 998.819 kb on + strand, within HER17_RS04385 at 998.819 kb on + strand, within HER17_RS04385 at 998.822 kb on - strand, within HER17_RS04385 at 998.871 kb on + strand, within HER17_RS04385 at 998.893 kb on + strand, within HER17_RS04385 at 998.987 kb on + strand at 999.065 kb on - strand at 999.067 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glucose remove 998,392 + +1.1 998,404 + +0.9 998,489 + HER17_RS04385 0.11 -1.6 998,490 - HER17_RS04385 0.11 -0.5 998,490 - HER17_RS04385 0.11 -1.5 998,518 + HER17_RS04385 0.16 -1.9 998,629 + HER17_RS04385 0.36 -1.3 998,629 + HER17_RS04385 0.36 +0.8 998,693 + HER17_RS04385 0.47 +0.1 998,806 + HER17_RS04385 0.67 -0.9 998,806 + HER17_RS04385 0.67 +0.4 998,806 + HER17_RS04385 0.67 -1.4 998,806 + HER17_RS04385 0.67 +1.3 998,819 + HER17_RS04385 0.70 -1.5 998,819 + HER17_RS04385 0.70 -0.7 998,819 + HER17_RS04385 0.70 -0.9 998,819 + HER17_RS04385 0.70 +0.1 998,822 - HER17_RS04385 0.70 -1.9 998,871 + HER17_RS04385 0.79 -1.3 998,893 + HER17_RS04385 0.83 +2.7 998,987 + +0.8 999,065 - -0.0 999,067 - -0.7
Or see this region's nucleotide sequence