Strain Fitness in Pseudomonas putida KT2440 around PP_1602

Experiment: Lauric (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPP_1601 and PP_1602 are separated by 63 nucleotidesPP_1602 and PP_1603 overlap by 4 nucleotidesPP_1603 and PP_1604 are separated by 1 nucleotides PP_1601: PP_1601 - UDP-3-O-acylglucosamine N-acyltransferase, at 1,795,693 to 1,796,748 _1601 PP_1602: PP_1602 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, at 1,796,812 to 1,797,303 _1602 PP_1603: PP_1603 - Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase, at 1,797,300 to 1,798,076 _1603 PP_1604: PP_1604 - Lipid-A-disaccharide synthase, at 1,798,078 to 1,799,205 _1604 Position (kb) 1796 1797 1798Strain fitness (log2 ratio) -1 0 1at 1796.749 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Lauric (C)
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1,796,749 + +0.6

Or see this region's nucleotide sequence