Experiment: Vogels_fungal_media 0.1X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_04475 and PS417_04480 are separated by 57 nucleotides PS417_04480 and PS417_04485 are separated by 182 nucleotides PS417_04485 and PS417_04490 are separated by 150 nucleotides
PS417_04475: PS417_04475 - hypothetical protein, at 991,354 to 991,941
_04475
PS417_04480: PS417_04480 - hypothetical protein, at 991,999 to 992,208
_04480
PS417_04485: PS417_04485 - hypothetical protein, at 992,391 to 992,648
_04485
PS417_04490: PS417_04490 - glycerol acyltransferase, at 992,799 to 993,962
_04490
Position (kb) 992
993 Strain fitness (log2 ratio) -2
-1
0
1
2 at 991.589 kb on + strand, within PS417_04475 at 991.589 kb on + strand, within PS417_04475 at 991.590 kb on - strand, within PS417_04475 at 991.702 kb on + strand, within PS417_04475 at 991.703 kb on - strand, within PS417_04475 at 991.726 kb on + strand, within PS417_04475 at 991.726 kb on + strand, within PS417_04475 at 991.726 kb on + strand, within PS417_04475 at 991.727 kb on - strand, within PS417_04475 at 992.096 kb on + strand, within PS417_04480 at 992.178 kb on - strand, within PS417_04480 at 992.219 kb on + strand at 992.249 kb on + strand at 992.278 kb on + strand at 992.286 kb on - strand at 992.286 kb on - strand at 992.291 kb on - strand at 992.316 kb on + strand at 992.335 kb on - strand at 992.377 kb on + strand at 992.378 kb on - strand at 992.429 kb on - strand, within PS417_04485 at 992.429 kb on - strand, within PS417_04485 at 992.431 kb on + strand, within PS417_04485 at 992.431 kb on + strand, within PS417_04485 at 992.432 kb on - strand, within PS417_04485 at 992.432 kb on - strand, within PS417_04485 at 992.432 kb on - strand, within PS417_04485 at 992.554 kb on + strand, within PS417_04485 at 992.555 kb on - strand, within PS417_04485 at 992.555 kb on - strand, within PS417_04485 at 992.726 kb on + strand at 992.727 kb on - strand at 992.800 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.1X remove 991,589 + PS417_04475 0.40 -0.0 991,589 + PS417_04475 0.40 -1.4 991,590 - PS417_04475 0.40 -0.3 991,702 + PS417_04475 0.59 +0.1 991,703 - PS417_04475 0.59 -1.1 991,726 + PS417_04475 0.63 -2.1 991,726 + PS417_04475 0.63 -2.2 991,726 + PS417_04475 0.63 -0.1 991,727 - PS417_04475 0.63 +1.8 992,096 + PS417_04480 0.46 -0.8 992,178 - PS417_04480 0.85 +0.6 992,219 + +1.2 992,249 + +0.5 992,278 + -0.9 992,286 - -1.4 992,286 - -1.5 992,291 - +2.0 992,316 + -1.0 992,335 - -2.6 992,377 + -0.4 992,378 - -1.2 992,429 - PS417_04485 0.15 -1.0 992,429 - PS417_04485 0.15 -1.5 992,431 + PS417_04485 0.16 +0.5 992,431 + PS417_04485 0.16 -0.3 992,432 - PS417_04485 0.16 -1.4 992,432 - PS417_04485 0.16 -0.4 992,432 - PS417_04485 0.16 -1.8 992,554 + PS417_04485 0.63 -0.0 992,555 - PS417_04485 0.64 -2.1 992,555 - PS417_04485 0.64 -1.4 992,726 + -1.3 992,727 - -2.3 992,800 + -0.6
Or see this region's nucleotide sequence