Strain Fitness in Pseudomonas simiae WCS417 around PS417_04530

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
999,735	-		PS417_04525	0.22	-1.1
999,854	+		PS417_04525	0.34	-0.1
999,854	+		PS417_04525	0.34	+0.2
999,855	-		PS417_04525	0.34	+0.7
999,855	-		PS417_04525	0.34	+1.3
999,855	-		PS417_04525	0.34	-0.4
999,855	-		PS417_04525	0.34	+1.2
999,855	-		PS417_04525	0.34	+0.0
1,000,371	-		PS417_04525	0.85	-0.5
1,000,496	+				+0.4
1,000,497	-				+0.8
1,000,497	-				-0.3
1,000,715	+		PS417_04530	0.17	+0.3
1,000,715	+		PS417_04530	0.17	+0.9
1,000,715	+		PS417_04530	0.17	+1.8
1,000,724	+		PS417_04530	0.18	-1.7
1,001,140	-		PS417_04530	0.61	+2.0
1,001,547	-				-0.1
1,001,547	-				-1.8
1,001,584	+				+0.8
1,001,584	+				-0.0
1,001,584	+				+1.2
1,001,585	-				+0.1
1,001,602	-				+0.9
1,001,638	+				+0.2
1,001,639	-				+0.2
1,001,850	+		PS417_04535	0.40	+0.2
1,001,851	-		PS417_04535	0.40	+0.4
1,001,851	-		PS417_04535	0.40	+0.1
1,002,202	+				-0.6
1,002,228	+				+0.1
1,002,378	+				+0.2
1,002,378	+				-0.9
1,002,430	+				-0.2
1,002,431	-				+0.6
1,002,431	-				-1.2
1,002,475	+				+1.2
1,002,476	-				+0.7
1,002,476	-				-0.8
1,002,488	+				-0.2
1,002,488	+				-0.1
1,002,489	-				+0.2