Strain Fitness in Pseudomonas simiae WCS417 around PS417_18935

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
4,099,339	-				+1.1
4,099,367	-				-0.2
4,100,011	-		PS417_18930	0.71	-0.2
4,100,393	-				+0.4
4,100,407	+				+0.1
4,100,661	-		PS417_18935	0.25	+0.1
4,100,661	-		PS417_18935	0.25	+1.1
4,100,703	-		PS417_18935	0.27	+0.4
4,100,807	+		PS417_18935	0.34	-0.0
4,101,008	+		PS417_18935	0.47	+0.4
4,101,200	+		PS417_18935	0.60	-0.8
4,101,201	-		PS417_18935	0.60	-0.2
4,101,201	-		PS417_18935	0.60	+0.3
4,101,201	-		PS417_18935	0.60	-0.4
4,101,201	-		PS417_18935	0.60	-0.1
4,101,201	-		PS417_18935	0.60	+0.7
4,101,251	+		PS417_18935	0.64	-0.3
4,101,252	-		PS417_18935	0.64	+0.4
4,101,329	+		PS417_18935	0.69	+1.5
4,101,482	+		PS417_18935	0.79	+0.7
4,101,482	+		PS417_18935	0.79	+0.4
4,101,482	+		PS417_18935	0.79	+1.2
4,101,483	-		PS417_18935	0.79	+0.7
4,101,575	+		PS417_18935	0.85	+1.3
4,101,624	+		PS417_18935	0.88	-0.8
4,101,625	-		PS417_18935	0.88	-1.0
4,101,720	+				-0.8
4,101,785	+				+0.3
4,101,785	+				+1.2
4,101,786	-				-0.0
4,101,786	-				+0.1
4,101,786	-				-0.1
4,101,786	-				-0.1
4,101,831	+				+0.3
4,101,831	+				+0.6
4,101,832	-				-0.2
4,101,910	+				-0.5
4,101,910	+				-0.4
4,101,923	+				-0.3
4,101,924	-				-0.6
4,101,924	-				-0.0
4,101,932	-				-0.1
4,101,984	+				-1.0
4,101,984	+				+0.8
4,101,984	+				+0.2
4,101,985	-				+0.5
4,102,078	+				+0.4
4,102,078	+				-0.6
4,102,079	-				-0.1
4,102,079	-				+0.3
4,102,160	-		PS417_18940	0.16	+0.5
4,102,363	+		PS417_18940	0.36	+0.5
4,102,363	+		PS417_18940	0.36	-0.3
4,102,453	+		PS417_18940	0.46	+0.8
4,102,472	-		PS417_18940	0.48	+0.5
4,102,472	-		PS417_18940	0.48	+2.0
4,102,732	+		PS417_18940	0.74	-1.0
4,102,732	+		PS417_18940	0.74	+0.2