Strain Fitness in Pseudomonas simiae WCS417 around PS417_18125

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,948,127	-				+1.3
3,948,173	+				-0.2
3,948,174	-				-0.2
3,948,890	+				-0.8
3,948,891	-				-0.0
3,949,087	-		PS417_18125	0.19	-0.6
3,949,104	+		PS417_18125	0.21	-0.3
3,949,366	-		PS417_18125	0.55	-1.6
3,949,534	-		PS417_18125	0.76	-0.7
3,949,534	-				+0.7
3,949,534	-		PS417_18125	0.76	-0.7
3,949,662	+				-0.3
3,949,778	+				-0.1
3,949,778	+				+0.2
3,949,779	-				-1.0
3,949,779	-				-0.4
3,949,779	-				+2.3
3,949,923	-		PS417_18130	0.24	+1.7
3,950,006	+		PS417_18130	0.34	+0.4
3,950,007	-		PS417_18130	0.34	-2.7
3,950,180	+		PS417_18130	0.56	+0.4
3,950,180	+				+0.3
3,950,181	-		PS417_18130	0.56	-0.6
3,950,186	+		PS417_18130	0.57	-1.3
3,950,186	+		PS417_18130	0.57	+0.1
3,950,186	+				-1.3
3,950,186	+		PS417_18130	0.57	+0.3
3,950,187	-		PS417_18130	0.57	+0.8
3,950,529	+				-0.6
3,950,530	-				+0.7
3,950,615	-				+0.4