Strain Fitness in Pseudomonas simiae WCS417 around PS417_17285

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,772,318	+		PS417_17275	0.41	+0.2
3,772,318	+		PS417_17275	0.41	-0.3
3,772,318	+		PS417_17275	0.41	+0.5
3,772,319	-		PS417_17275	0.42	-0.9
3,772,418	-		PS417_17275	0.57	+0.0
3,772,432	+		PS417_17275	0.59	-0.5
3,772,499	+		PS417_17275	0.70	-0.6
3,772,500	-		PS417_17275	0.70	+0.4
3,772,574	-		PS417_17275	0.82	-0.5
3,772,761	+				+0.2
3,772,761	+				+0.3
3,772,762	-				+0.6
3,772,776	+				-2.2
3,772,830	+				+1.1
3,772,875	-				+0.1
3,772,875	-				-1.8
3,772,890	-				-0.3
3,772,891	+				+0.2
3,772,945	+				-0.6
3,772,945	+				-0.6
3,772,946	-				-0.7
3,772,949	+				+1.3
3,772,950	-				-0.4
3,772,950	-				+0.2
3,772,950	-				-0.5
3,773,141	+				+1.1
3,773,268	+		PS417_17285	0.26	-3.8
3,773,268	+		PS417_17285	0.26	-0.9
3,773,296	-		PS417_17285	0.33	-1.1
3,773,296	-		PS417_17285	0.33	-1.9
3,773,357	+				-0.9
3,773,357	+		PS417_17285	0.47	-0.2
3,773,357	+		PS417_17285	0.47	-0.6
3,773,357	+		PS417_17285	0.47	-1.1
3,773,357	+		PS417_17285	0.47	-0.5
3,773,552	+				-0.5
3,773,552	+				-0.3
3,773,552	+				-0.2
3,773,575	+				-0.6
3,773,594	+				-0.3
3,773,594	+				-0.1
3,773,595	-				-0.9
3,773,595	-				-1.0
3,773,595	-				-0.5
3,773,595	-				+0.1
3,773,635	+				+0.9
3,773,636	-				+0.1
3,773,648	+				+1.2
3,773,649	-				+0.4
3,773,649	-				+0.8
3,773,649	-				+0.3
3,773,652	+				+0.9
3,773,652	+				+0.2
3,773,653	-				-0.3
3,773,653	-				-0.9
3,773,678	-				+0.3
3,773,678	-				+1.2
3,773,830	-				+1.0
3,773,924	+				+1.2
3,773,925	-				+1.4
3,773,966	+				+1.2
3,773,966	+				+0.6
3,773,967	-				+1.2
3,773,967	-				+1.1
3,773,967	-				+1.3
3,773,967	-				+0.3
3,773,967	-				+1.1
3,773,968	+				+1.2
3,773,972	+				+1.8
3,773,972	+				-0.6
3,773,972	+				+0.8
3,773,972	+				+1.7
3,773,973	-				+1.1
3,774,167	+		PS417_17290	0.12	+0.1
3,774,167	+		PS417_17290	0.12	+1.2
3,774,167	+		PS417_17290	0.12	+1.4