Strain Fitness in Pseudomonas simiae WCS417 around PS417_16790

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,662,374	+		PS417_16785	0.34	-0.5
3,662,408	-		PS417_16785	0.37	-0.3
3,662,695	+		PS417_16785	0.64	+0.3
3,662,695	+		PS417_16785	0.64	-0.5
3,662,696	-				+1.6
3,662,815	+		PS417_16785	0.76	-0.3
3,662,875	+		PS417_16785	0.81	-0.1
3,662,950	+		PS417_16785	0.88	-0.0
3,663,123	+				+1.2
3,663,125	+				+0.8
3,663,125	+				+0.2
3,663,126	-				-0.4
3,663,126	-				-1.2
3,663,146	-				+1.0
3,663,146	-				-0.4
3,663,149	+				+0.1
3,663,150	-				-1.4
3,663,194	+		PS417_16790	0.13	-0.9
3,663,195	-		PS417_16790	0.13	-1.3
3,663,906	-				-1.2
3,663,906	-				-0.2
3,663,977	-				-1.0
3,664,132	-		PS417_16795	0.23	+1.7
3,664,794	+				+0.0
3,664,794	+				-0.8
3,664,795	-				-0.4
3,664,795	-				+0.0
3,664,795	-				-0.3