Strain Fitness in Pseudomonas simiae WCS417 around PS417_15565

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,407,197	-		PS417_15555	0.72	-0.0
3,407,271	+		PS417_15555	0.77	+1.0
3,407,271	+		PS417_15555	0.77	+0.1
3,407,272	-		PS417_15555	0.77	+0.4
3,407,385	+		PS417_15555	0.85	+0.3
3,407,552	+				+0.6
3,407,664	+				+0.5
3,407,708	+				-0.8
3,407,708	+				-0.9
3,407,708	+				-0.7
3,407,709	-				+0.1
3,407,709	-				+1.2
3,407,870	+		PS417_15560	0.48	-0.5
3,407,870	+		PS417_15560	0.48	+0.5
3,407,871	-				-0.6
3,408,031	+				-0.0
3,408,031	+				+2.8
3,408,134	+				+1.0
3,408,134	+				-0.7
3,408,135	-				-0.4
3,408,135	-				+1.2
3,408,139	-				-0.2
3,408,183	+				+0.2
3,408,291	+				+0.1
3,408,291	+				-0.1
3,408,291	+				-1.8
3,408,292	-				-0.8
3,408,292	-				-0.4
3,408,292	-				-0.0
3,408,292	-				-0.4
3,408,292	-				-0.4
3,408,292	-				-0.2
3,408,655	+		PS417_15565	0.24	-1.5
3,408,655	+		PS417_15565	0.24	-0.0
3,408,664	+		PS417_15565	0.24	-0.0
3,408,665	-		PS417_15565	0.24	-0.3
3,408,665	-		PS417_15565	0.24	+0.2
3,408,665	-		PS417_15565	0.24	-0.1
3,408,665	-		PS417_15565	0.24	-0.0
3,408,760	+		PS417_15565	0.29	-0.5
3,408,760	+		PS417_15565	0.29	+0.2
3,408,761	-		PS417_15565	0.29	-0.1
3,408,761	-		PS417_15565	0.29	+0.2
3,408,839	-		PS417_15565	0.33	-0.1
3,409,206	+		PS417_15565	0.51	+0.2
3,409,206	+		PS417_15565	0.51	-0.2
3,409,207	-		PS417_15565	0.51	-0.9
3,409,207	-				+0.6
3,409,207	-		PS417_15565	0.51	-1.2
3,409,384	-		PS417_15565	0.59	+0.0
3,409,384	-		PS417_15565	0.59	-0.4
3,409,420	+		PS417_15565	0.61	-1.0
3,409,496	-		PS417_15565	0.65	-1.8
3,409,507	+		PS417_15565	0.65	-0.6
3,409,507	+		PS417_15565	0.65	-0.8
3,409,508	-		PS417_15565	0.65	-0.3
3,409,537	+		PS417_15565	0.67	+0.5
3,409,537	+		PS417_15565	0.67	-0.3
3,409,538	-		PS417_15565	0.67	-0.6
3,409,803	+		PS417_15565	0.80	-0.4
3,409,811	-		PS417_15565	0.80	+0.5
3,409,843	+		PS417_15565	0.82	-0.2
3,409,844	-		PS417_15565	0.82	-1.0
3,409,921	+		PS417_15565	0.85	-0.0
3,410,084	-				-0.8
3,410,274	+				-0.7
3,410,275	-				-0.3
3,410,390	+				+0.9
3,410,390	+				-1.7
3,410,391	-				+0.8
3,410,535	+		PS417_15570	0.10	-0.0
3,410,536	-		PS417_15570	0.10	+0.1
3,410,536	-		PS417_15570	0.10	-1.1
3,410,637	+		PS417_15570	0.14	-0.9
3,410,637	+		PS417_15570	0.14	+0.5
3,410,785	-		PS417_15570	0.20	-0.6
3,410,919	+		PS417_15570	0.26	-0.4
3,410,985	+		PS417_15570	0.28	+0.4
3,410,986	-		PS417_15570	0.28	-0.5
3,411,033	-		PS417_15570	0.30	+1.6