Strain Fitness in Pseudomonas simiae WCS417 around PS417_06880

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
1,522,752	-				+0.1
1,523,301	+		PS417_06875	0.59	+1.1
1,523,302	-		PS417_06875	0.59	-0.7
1,523,302	-		PS417_06875	0.59	-0.1
1,523,302	-		PS417_06875	0.59	+0.5
1,523,370	+		PS417_06875	0.66	-1.2
1,523,371	-		PS417_06875	0.66	+0.3
1,523,371	-		PS417_06875	0.66	+0.5
1,524,171	-		PS417_06880	0.88	-1.3
1,524,171	-		PS417_06880	0.88	-0.4
1,524,177	+		PS417_06880	0.89	-0.8
1,524,177	+		PS417_06880	0.89	-0.2
1,524,177	+		PS417_06880	0.89	-0.8
1,524,177	+		PS417_06880	0.89	-0.9
1,524,184	-				-0.6
1,524,185	+				+0.9
1,524,185	+				+0.8
1,524,185	+				-0.4
1,524,185	+				-0.5
1,524,185	+				-1.3
1,524,185	+				-1.1
1,524,186	-				+2.6
1,524,646	+				-0.6
1,524,646	+		PS417_06885	0.24	-0.6
1,524,646	+		PS417_06885	0.24	-1.5
1,524,646	+		PS417_06885	0.24	+0.2
1,524,647	-		PS417_06885	0.24	-0.4
1,524,647	-		PS417_06885	0.24	-0.2
1,524,648	+		PS417_06885	0.24	-2.2
1,524,749	-		PS417_06885	0.36	+0.3
1,524,749	-		PS417_06885	0.36	-0.4
1,524,899	-		PS417_06885	0.53	+0.9
1,525,148	-		PS417_06885	0.81	+1.6