Strain Fitness in Pseudomonas simiae WCS417 around PS417_05385

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
1,198,525	+		PS417_05380	0.44	+0.1
1,198,745	-		PS417_05380	0.58	-0.4
1,199,221	+		PS417_05380	0.89	-0.2
1,199,222	-		PS417_05380	0.89	+0.6
1,199,332	+				+1.5
1,199,547	+				-0.1
1,200,366	+		PS417_05385	0.36	-0.7
1,200,367	-		PS417_05385	0.36	+0.0
1,200,367	-		PS417_05385	0.36	+1.2
1,200,367	-		PS417_05385	0.36	-1.2
1,200,485	+		PS417_05385	0.41	-0.7
1,200,485	+		PS417_05385	0.41	-0.5
1,200,486	-		PS417_05385	0.41	+0.2
1,200,887	+		PS417_05385	0.57	-0.8
1,200,887	+		PS417_05385	0.57	-1.2
1,200,888	-		PS417_05385	0.57	-2.1
1,200,928	+		PS417_05385	0.59	-0.2
1,200,954	-		PS417_05385	0.60	-0.8
1,201,523	+		PS417_05385	0.83	-1.4
1,201,524	-		PS417_05385	0.83	+0.7
1,201,524	-		PS417_05385	0.83	-0.5
1,201,667	+		PS417_05385	0.89	+0.5
1,201,667	+		PS417_05385	0.89	-1.5
1,201,667	+		PS417_05385	0.89	+0.5
1,201,668	-		PS417_05385	0.89	-0.9
1,201,668	-		PS417_05385	0.89	+0.3
1,201,718	+				+1.8
1,201,720	+				+0.5
1,201,730	+				+0.1
1,201,731	-				-0.7
1,201,733	+				-0.2
1,201,866	+				-0.4
1,202,073	+				-0.1
1,202,296	-				+0.5
1,202,449	+				-0.7
1,202,449	+				-2.5
1,202,450	-				-0.4
1,202,450	-				-1.5
1,202,450	-				-0.3
1,202,450	-				+0.0
1,202,450	-				+0.0
1,202,937	+		PS417_05390	0.19	+0.5