Strain Fitness in Pseudomonas simiae WCS417 around PS417_04550

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
1,005,420	-		PS417_04545	0.49	+0.6
1,005,456	-		PS417_04545	0.51	+0.9
1,005,467	+		PS417_04545	0.52	-1.5
1,005,468	-		PS417_04545	0.52	-0.1
1,005,468	-		PS417_04545	0.52	+0.5
1,005,607	+		PS417_04545	0.59	-0.7
1,005,607	+		PS417_04545	0.59	+0.4
1,005,607	+		PS417_04545	0.59	+0.1
1,005,608	-		PS417_04545	0.59	+0.0
1,005,647	-		PS417_04545	0.61	-0.7
1,005,801	-		PS417_04545	0.70	-1.8
1,005,801	-		PS417_04545	0.70	-0.4
1,006,073	+		PS417_04545	0.84	+0.2
1,006,268	+				+0.8
1,006,268	+				-1.5
1,006,269	-				-0.4
1,006,555	+		PS417_04550	0.12	-0.6
1,006,555	+		PS417_04550	0.12	-0.5
1,006,555	+		PS417_04550	0.12	-0.4
1,006,555	+		PS417_04550	0.12	-0.8
1,006,619	+		PS417_04550	0.16	+0.2
1,006,670	+		PS417_04550	0.20	-0.2
1,006,670	+		PS417_04550	0.20	+1.1
1,006,670	+		PS417_04550	0.20	+0.3
1,006,670	+		PS417_04550	0.20	-0.2
1,006,670	+		PS417_04550	0.20	+1.1
1,006,671	-		PS417_04550	0.20	-1.2
1,006,671	-		PS417_04550	0.20	-0.9
1,006,671	-		PS417_04550	0.20	+1.7
1,006,671	-		PS417_04550	0.20	-0.3
1,006,671	-		PS417_04550	0.20	-0.9
1,006,671	-				-0.3
1,006,887	+		PS417_04550	0.36	-0.4
1,006,887	+		PS417_04550	0.36	-0.5
1,006,988	+		PS417_04550	0.44	-0.8
1,007,008	-		PS417_04550	0.45	-0.4
1,007,030	+		PS417_04550	0.47	+0.5
1,007,063	+		PS417_04550	0.49	-0.9
1,007,166	-		PS417_04550	0.57	-0.7
1,007,166	-		PS417_04550	0.57	-2.1
1,007,210	+		PS417_04550	0.60	-1.3
1,007,211	-		PS417_04550	0.60	-0.4
1,007,211	-		PS417_04550	0.60	-0.0
1,007,211	-		PS417_04550	0.60	-0.2
1,007,267	+		PS417_04550	0.64	-0.3
1,007,267	+		PS417_04550	0.64	-0.3
1,007,267	+		PS417_04550	0.64	-0.5
1,007,267	+		PS417_04550	0.64	-0.8
1,007,268	-		PS417_04550	0.64	+0.6
1,007,268	-		PS417_04550	0.64	-0.3
1,007,268	-		PS417_04550	0.64	-0.8
1,007,268	-		PS417_04550	0.64	-0.9
1,007,268	-		PS417_04550	0.64	+0.1
1,007,268	-		PS417_04550	0.64	-0.3
1,007,268	-		PS417_04550	0.64	+0.1
1,007,268	-		PS417_04550	0.64	+0.1
1,007,321	+		PS417_04550	0.68	+0.6
1,007,340	-		PS417_04550	0.69	+0.0
1,007,474	+		PS417_04550	0.79	+0.4
1,007,474	+		PS417_04550	0.79	-0.6
1,007,585	+		PS417_04550	0.87	-1.1
1,007,585	+		PS417_04550	0.87	-1.6
1,007,586	-		PS417_04550	0.87	-0.8
1,007,586	-		PS417_04550	0.87	-0.7
1,007,588	+		PS417_04550	0.87	-1.4
1,007,588	+		PS417_04550	0.87	+0.3
1,007,589	-		PS417_04550	0.88	-1.2
1,007,627	+				-1.9
1,007,628	-				+0.2
1,007,628	-				+0.9
1,007,687	+				+0.5
1,007,767	-				-2.5
1,007,927	-				+0.2
1,007,927	-				-0.4
1,007,969	+				+0.4
1,007,970	-				+0.2
1,008,051	-				-1.1
1,008,661	-		PS417_04555	0.25	-1.7