Strain Fitness in Pseudomonas simiae WCS417 around PS417_28335

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
6,115,106	-		PS417_28325	0.33	-0.5
6,115,330	-		PS417_28325	0.87	-0.5
6,115,330	-		PS417_28325	0.87	+0.1
6,115,790	+		PS417_28330	0.73	-0.2
6,115,790	+		PS417_28330	0.73	-0.1
6,115,790	+		PS417_28330	0.73	-1.4
6,115,791	-		PS417_28330	0.73	-0.2
6,115,791	-		PS417_28330	0.73	-0.4
6,115,791	-		PS417_28330	0.73	-0.3
6,115,791	-		PS417_28330	0.73	-1.2
6,115,791	-		PS417_28330	0.73	-0.5
6,115,791	-		PS417_28330	0.73	-2.8
6,116,057	+				-0.4
6,116,057	+				+0.4
6,116,058	-				-0.8
6,116,058	-				+0.1
6,116,058	-				+0.3
6,116,166	-		PS417_28335	0.17	-0.8
6,116,198	-		PS417_28335	0.19	+0.4
6,116,300	+		PS417_28335	0.27	-0.3
6,116,300	+		PS417_28335	0.27	-0.4
6,116,300	+		PS417_28335	0.27	+0.0
6,116,300	+		PS417_28335	0.27	-1.0
6,116,301	-		PS417_28335	0.27	+0.6
6,116,301	-		PS417_28335	0.27	-0.8
6,116,301	-		PS417_28335	0.27	-0.2
6,116,319	+		PS417_28335	0.28	-0.5
6,116,320	-		PS417_28335	0.28	-0.7
6,116,407	+		PS417_28335	0.35	+0.7
6,116,407	+		PS417_28335	0.35	+0.0
6,116,407	+		PS417_28335	0.35	-0.4
6,116,407	+		PS417_28335	0.35	+0.5
6,116,408	-		PS417_28335	0.35	+0.6
6,116,408	-		PS417_28335	0.35	-0.2
6,116,756	+				+1.9
6,116,756	+		PS417_28335	0.61	+0.0
6,116,757	-		PS417_28335	0.61	-0.2
6,116,881	+		PS417_28335	0.70	-0.6
6,116,882	-		PS417_28335	0.70	-0.3
6,117,056	+		PS417_28335	0.83	-0.2
6,117,060	+		PS417_28335	0.83	-2.0
6,117,060	+		PS417_28335	0.83	+0.0
6,117,061	-				-0.1
6,117,061	-		PS417_28335	0.84	-0.0
6,117,061	-				+1.9
6,117,061	-		PS417_28335	0.84	+1.1
6,117,297	-				+0.7
6,117,314	+				-0.1
6,117,465	+		PS417_28340	0.26	+0.2
6,117,741	+		PS417_28340	0.79	+0.0
6,117,742	-				+0.5
6,117,970	+				-0.4
6,118,011	+				-0.2
6,118,012	-				+0.9
6,118,012	-				+0.3
6,118,126	-		PS417_28345	0.10	-0.0
6,118,176	+		PS417_28345	0.14	-0.7