Strain Fitness in Pseudomonas simiae WCS417 around PS417_25765

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
5,561,480	+		PS417_25760	0.38	-1.4
5,561,480	+		PS417_25760	0.38	-2.0
5,561,580	-		PS417_25760	0.47	+0.3
5,561,580	-		PS417_25760	0.47	-0.4
5,561,580	-		PS417_25760	0.47	-0.5
5,561,894	+		PS417_25760	0.75	+0.2
5,561,894	+		PS417_25760	0.75	-0.5
5,561,925	+		PS417_25760	0.78	+0.3
5,562,111	-				+0.5
5,562,169	-				+0.2
5,562,169	-				+0.8
5,562,208	+				-0.2
5,562,369	-				-0.8
5,562,384	+				-0.2
5,562,385	-				-0.2
5,562,385	-				+0.2
5,562,409	-				+0.3
5,562,436	+				+1.0
5,562,642	+		PS417_25765	0.41	-0.7
5,562,643	-		PS417_25765	0.41	-1.4
5,563,033	-				-1.4
5,563,033	-				+0.1
5,563,243	+		PS417_25770	0.11	-0.0
5,563,244	-				+1.4
5,563,244	-		PS417_25770	0.11	+0.5
5,563,472	+		PS417_25770	0.22	+0.2
5,563,472	+		PS417_25770	0.22	-0.4
5,563,473	-		PS417_25770	0.22	+0.3
5,563,744	-		PS417_25770	0.36	+0.1
5,563,869	-		PS417_25770	0.42	-0.9