Strain Fitness in Pseudomonas simiae WCS417 around PS417_23830

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
5,156,587	+		PS417_23825	0.64	+0.9
5,156,686	-		PS417_23825	0.68	+0.3
5,156,686	-		PS417_23825	0.68	-0.3
5,156,730	-		PS417_23825	0.70	-2.1
5,156,847	-		PS417_23825	0.75	-1.3
5,157,072	-		PS417_23825	0.85	+0.7
5,157,236	+				-0.7
5,157,236	+				+0.9
5,157,236	+				+2.3
5,157,237	-				+0.1
5,157,237	-				-0.7
5,157,237	-				-0.4
5,157,300	-				-1.3
5,157,300	-				+0.9
5,157,434	+				+1.0
5,157,436	+				+0.2
5,157,436	+				+0.3
5,157,437	-				+0.2
5,157,584	+				-0.7
5,157,585	-				-0.2
5,157,585	-				-0.4
5,157,659	+				-3.0
5,157,660	-				-0.2
5,157,660	-				+0.5
5,157,660	-				-1.8
5,157,661	+				-0.5
5,157,662	-				+0.0
5,157,662	-				-0.5
5,157,773	+		PS417_23830	0.15	-2.9
5,158,072	+		PS417_23830	0.34	-2.2
5,158,072	+		PS417_23830	0.34	+0.3
5,158,095	+		PS417_23830	0.36	-1.0
5,158,403	+		PS417_23830	0.55	-1.0
5,158,508	+		PS417_23830	0.62	-0.8
5,158,509	-		PS417_23830	0.62	-0.8
5,158,529	+		PS417_23830	0.63	-1.6
5,158,529	+		PS417_23830	0.63	+0.0
5,158,529	+		PS417_23830	0.63	-1.7
5,158,530	-		PS417_23830	0.63	-1.9
5,158,530	-		PS417_23830	0.63	-1.7
5,158,530	-		PS417_23830	0.63	-0.3
5,158,530	-		PS417_23830	0.63	+0.3
5,158,531	+		PS417_23830	0.64	+0.5
5,158,532	-		PS417_23830	0.64	+0.8
5,158,629	+		PS417_23830	0.70	-0.4
5,158,629	+		PS417_23830	0.70	+0.2
5,158,630	-		PS417_23830	0.70	-1.1
5,158,630	-		PS417_23830	0.70	-1.3
5,158,630	-		PS417_23830	0.70	-1.1
5,158,630	-		PS417_23830	0.70	-0.8
5,158,706	+		PS417_23830	0.75	-0.8
5,158,706	+		PS417_23830	0.75	-0.4
5,158,706	+				-2.6
5,158,707	-		PS417_23830	0.75	-1.1
5,158,707	-		PS417_23830	0.75	-1.0
5,158,733	+		PS417_23830	0.76	-1.6
5,158,798	+		PS417_23830	0.81	-0.3
5,158,799	-		PS417_23830	0.81	-0.9
5,158,834	+		PS417_23830	0.83	-0.7
5,158,839	+		PS417_23830	0.83	-2.8
5,158,839	+		PS417_23830	0.83	-1.7
5,158,839	+		PS417_23830	0.83	-0.1
5,158,840	-		PS417_23830	0.83	-0.9
5,159,071	+				-0.5
5,159,072	-				-0.9
5,159,147	+				+0.5
5,159,157	-				+3.3
5,159,158	+				+0.2
5,159,169	+				+0.2
5,159,338	+		PS417_23835	0.42	+1.1
5,159,366	+		PS417_23835	0.50	-0.4
5,159,456	+		PS417_23835	0.77	-0.9
5,159,456	+		PS417_23835	0.77	+0.0
5,159,456	+		PS417_23835	0.77	-1.1
5,159,457	-		PS417_23835	0.77	-0.8
5,159,610	+				+0.2
5,159,662	-				+0.1
5,159,891	+		PS417_23840	0.59	+1.7
5,159,891	+		PS417_23840	0.59	+0.2
5,159,891	+		PS417_23840	0.59	-0.5
5,159,891	+		PS417_23840	0.59	+0.1
5,159,891	+		PS417_23840	0.59	-0.9
5,159,892	-		PS417_23840	0.60	-0.5
5,159,892	-		PS417_23840	0.60	+0.1
5,159,892	-		PS417_23840	0.60	-0.0
5,159,892	-		PS417_23840	0.60	+0.3
5,160,025	-				+0.0