Strain Fitness in Pseudomonas simiae WCS417 around PS417_23355

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
5,054,663	+		PS417_23350	0.20	-1.0
5,054,663	+		PS417_23350	0.20	-0.7
5,054,664	-				+0.3
5,054,664	-		PS417_23350	0.21	-0.1
5,054,664	-		PS417_23350	0.21	+0.0
5,054,664	-		PS417_23350	0.21	+0.2
5,054,687	+		PS417_23350	0.23	-0.1
5,054,687	+		PS417_23350	0.23	-0.8
5,054,705	-		PS417_23350	0.25	+0.4
5,054,705	-		PS417_23350	0.25	-0.1
5,054,738	+		PS417_23350	0.29	+0.6
5,054,739	-		PS417_23350	0.29	+0.1
5,054,739	-		PS417_23350	0.29	-0.2
5,054,841	+		PS417_23350	0.40	+0.0
5,054,841	+		PS417_23350	0.40	-0.6
5,054,842	-		PS417_23350	0.40	-0.9
5,054,842	-		PS417_23350	0.40	-1.7
5,054,842	-		PS417_23350	0.40	-0.7
5,054,842	-		PS417_23350	0.40	-1.1
5,055,117	-		PS417_23350	0.71	+0.3
5,055,143	+		PS417_23350	0.74	+1.3
5,055,143	+		PS417_23350	0.74	+0.1
5,055,143	+		PS417_23350	0.74	-0.8
5,055,143	+		PS417_23350	0.74	+0.4
5,055,143	+		PS417_23350	0.74	-0.3
5,055,144	-		PS417_23350	0.74	-0.5
5,055,144	-		PS417_23350	0.74	+0.8
5,055,144	-		PS417_23350	0.74	+1.5
5,055,198	-		PS417_23350	0.80	-2.6
5,055,249	-		PS417_23350	0.86	-0.2
5,055,344	+				-1.1
5,055,345	-				-0.3
5,055,345	-				-1.3
5,055,345	-				-0.7
5,055,345	-				-2.2
5,055,345	-				-0.7
5,055,559	+				+0.4
5,055,559	+				+0.6
5,055,560	-				+0.2
5,055,560	-				-0.9
5,055,659	-		PS417_23355	0.16	+0.5
5,055,666	+		PS417_23355	0.16	+0.0
5,055,666	+		PS417_23355	0.16	-0.0
5,055,666	+		PS417_23355	0.16	+0.7
5,055,712	-		PS417_23355	0.20	+0.7
5,055,721	-		PS417_23355	0.21	-0.3
5,055,721	-		PS417_23355	0.21	-1.9
5,055,721	-		PS417_23355	0.21	+0.5
5,055,897	+		PS417_23355	0.35	-0.5
5,055,897	+		PS417_23355	0.35	+0.7
5,055,898	-		PS417_23355	0.35	-0.2
5,055,914	+		PS417_23355	0.36	-0.0
5,055,914	+		PS417_23355	0.36	+0.1
5,055,914	+		PS417_23355	0.36	+0.9
5,055,915	-		PS417_23355	0.36	+1.3
5,055,915	-		PS417_23355	0.36	+0.7
5,055,915	-		PS417_23355	0.36	+0.9
5,055,931	+		PS417_23355	0.38	+0.6
5,055,932	-		PS417_23355	0.38	+0.7
5,056,324	+		PS417_23355	0.69	+1.3
5,056,324	+		PS417_23355	0.69	-0.9
5,056,325	-		PS417_23355	0.69	+1.6
5,056,468	+		PS417_23355	0.81	-1.1
5,056,618	-				+2.1
5,056,712	-				+0.3
5,056,776	-				-2.3
5,057,041	+				+0.5
5,057,066	+				-1.1
5,057,067	-				-0.1
5,057,067	-				-0.5
5,057,067	-				+0.3
5,057,283	-		PS417_23360	0.32	+0.7