Strain Fitness in Pseudomonas simiae WCS417 around PS417_22000

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
4,769,494	+				+0.3
4,769,498	+				-0.5
4,769,498	+				+0.5
4,769,498	+				+0.2
4,769,498	+				+0.7
4,769,498	+				+0.3
4,769,499	-				+1.2
4,769,499	-				+0.2
4,769,499	-				-0.8
4,769,499	-				-0.5
4,769,558	+				+0.1
4,769,559	-				-0.1
4,769,745	-				-0.2
4,769,756	+				-0.2
4,769,756	+				-0.7
4,769,757	-				+0.5
4,769,757	-				+1.0
4,769,806	+				-0.2
4,769,806	+				-0.7
4,769,836	+				-0.6
4,769,994	+		PS417_21995	0.77	-0.7
4,769,995	-		PS417_21995	0.78	-0.8
4,769,995	-		PS417_21995	0.78	-1.1
4,769,995	-		PS417_21995	0.78	-0.3
4,770,000	+		PS417_21995	0.80	-0.9
4,770,001	-		PS417_21995	0.80	-0.3
4,770,010	-		PS417_21995	0.84	-2.3
4,770,053	-				+2.3
4,770,107	+				+0.1
4,770,113	+				-0.2
4,770,114	-				-1.3
4,770,182	+				-0.4
4,770,182	+				-0.8
4,770,245	+				+0.9
4,770,245	+				+0.7
4,770,528	-		PS417_22000	0.49	+0.8
4,770,588	+		PS417_22000	0.59	-0.4
4,770,679	-		PS417_22000	0.73	-1.4
4,770,730	+		PS417_22000	0.81	-0.9
4,770,731	-		PS417_22000	0.81	-1.4
4,770,786	+				-0.5
4,770,787	-				-1.4
4,770,787	-				-0.4
4,770,790	-				+0.1
4,770,790	-				-1.1
4,770,847	-				-0.1
4,770,858	+				+0.4
4,770,879	+				-1.1
4,771,139	+		PS417_22005	0.37	-0.1
4,771,140	-		PS417_22005	0.38	-0.5
4,771,310	+		PS417_22005	0.61	+0.5
4,771,311	-		PS417_22005	0.61	+0.4
4,771,311	-		PS417_22005	0.61	+1.0
4,771,596	-				+0.7
4,771,596	-				-0.4