Strain Fitness in Pseudomonas simiae WCS417 around PS417_20530

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
4,456,591	-				+0.1
4,456,724	+		PS417_20525	0.12	-0.2
4,456,725	-		PS417_20525	0.12	+0.3
4,456,925	+		PS417_20525	0.34	-0.3
4,457,007	+		PS417_20525	0.43	-0.9
4,457,008	-		PS417_20525	0.43	-0.5
4,457,008	-		PS417_20525	0.43	-1.1
4,457,584	+				-0.3
4,457,584	+				-0.2
4,457,585	-				+0.6
4,457,935	+		PS417_20530	0.48	+0.2
4,457,973	-		PS417_20530	0.53	-0.4
4,457,973	-		PS417_20530	0.53	-1.0
4,457,995	-		PS417_20530	0.56	-0.9
4,458,088	+		PS417_20530	0.67	-0.3
4,458,088	+		PS417_20530	0.67	-1.5
4,458,089	-		PS417_20530	0.67	-1.2
4,458,089	-		PS417_20530	0.67	-0.2
4,458,089	-		PS417_20530	0.67	-0.4
4,458,184	+		PS417_20530	0.79	+0.4
4,458,184	+		PS417_20530	0.79	-0.9
4,458,184	+		PS417_20530	0.79	-0.2
4,458,185	-		PS417_20530	0.79	-0.4
4,458,185	-		PS417_20530	0.79	-0.4
4,458,185	-		PS417_20530	0.79	-0.8
4,458,185	-		PS417_20530	0.79	-0.7
4,458,185	-		PS417_20530	0.79	-0.5
4,458,212	-		PS417_20530	0.83	-0.6
4,458,215	+		PS417_20530	0.83	-0.6
4,458,216	-		PS417_20530	0.83	-0.9
4,458,440	+		PS417_20535	0.15	-0.3
4,458,440	+		PS417_20535	0.15	+0.1
4,458,440	+		PS417_20535	0.15	+1.3
4,458,523	+		PS417_20535	0.30	-0.0
4,458,523	+		PS417_20535	0.30	+0.2
4,458,523	+		PS417_20535	0.30	-0.6
4,458,524	-		PS417_20535	0.30	+0.4
4,458,541	+		PS417_20535	0.33	+0.2
4,458,671	+		PS417_20535	0.56	+0.8
4,458,671	+		PS417_20535	0.56	-0.0
4,458,672	-		PS417_20535	0.56	-0.2
4,458,672	-		PS417_20535	0.56	-0.0
4,458,672	-		PS417_20535	0.56	+0.5
4,458,672	-		PS417_20535	0.56	-0.8
4,458,889	+				+2.3
4,458,889	+				+0.6
4,458,890	-				+0.4
4,458,890	-				+0.0
4,458,921	+				+0.3
4,458,928	+				+0.6
4,458,929	-				-0.2
4,458,992	+				+0.9
4,458,993	-				+0.2
4,458,993	-				-0.2
4,458,996	+				+0.8
4,458,996	+				+0.2
4,458,996	+				-0.3
4,458,996	+				+0.4
4,458,997	-				-1.1
4,458,997	-				-0.4
4,458,997	-				-0.2
4,458,997	-				+0.3
4,458,997	-				-0.6
4,458,997	-				+0.9
4,459,082	+				-0.2
4,459,088	+				+0.0
4,459,089	-				-0.7
4,459,089	-				-0.4
4,459,091	+				-3.4
4,459,092	-				-0.2