Strain Fitness in Pseudomonas simiae WCS417 around PS417_20500

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
4,451,664	+		PS417_20490	0.72	-0.0
4,451,665	-		PS417_20490	0.72	+1.0
4,451,682	+		PS417_20490	0.73	-0.5
4,451,682	+		PS417_20490	0.73	-0.3
4,451,682	+		PS417_20490	0.73	-0.1
4,451,683	-		PS417_20490	0.73	-0.6
4,451,683	-		PS417_20490	0.73	+0.6
4,451,683	-		PS417_20490	0.73	-0.8
4,451,683	-		PS417_20490	0.73	-1.5
4,451,683	-		PS417_20490	0.73	+1.5
4,451,808	+		PS417_20490	0.83	-0.3
4,451,811	+				-3.0
4,451,811	+		PS417_20490	0.84	-0.6
4,451,811	+		PS417_20490	0.84	-0.5
4,451,812	-		PS417_20490	0.84	-0.2
4,451,830	-		PS417_20490	0.85	-0.6
4,451,830	-		PS417_20490	0.85	+0.1
4,451,858	+		PS417_20490	0.87	+0.4
4,451,859	-		PS417_20490	0.87	-1.0
4,451,859	-		PS417_20490	0.87	+0.9
4,451,859	-		PS417_20490	0.87	-0.9
4,451,926	+				+0.2
4,451,927	-				-2.5
4,451,950	-				-0.8
4,451,971	-				+0.3
4,451,971	-				-1.2
4,451,971	-				-0.8
4,451,971	-				-0.7
4,452,018	+				+0.6
4,452,019	-				-0.1
4,452,121	+				-0.3
4,452,121	+				+0.2
4,452,144	+				+1.3
4,452,186	-				+0.3
4,452,428	+		PS417_20495	0.60	+0.4
4,452,553	-				-1.7
4,452,598	-		PS417_20500	0.10	-0.7
4,452,601	+		PS417_20500	0.11	+0.2
4,452,686	+		PS417_20500	0.30	-0.5
4,452,687	-		PS417_20500	0.30	-0.7
4,452,698	+		PS417_20500	0.33	+0.9
4,452,800	-		PS417_20500	0.55	-2.0
4,452,820	-		PS417_20500	0.60	-0.5
4,452,891	+		PS417_20500	0.76	-0.9
4,452,891	+		PS417_20500	0.76	-1.0
4,452,892	-		PS417_20500	0.76	-0.4
4,452,922	+		PS417_20500	0.82	-2.0
4,452,923	-		PS417_20500	0.83	-0.3
4,452,934	-		PS417_20500	0.85	-1.0
4,453,025	+				-1.3
4,453,088	-				+0.1
4,453,088	-				+1.7
4,453,141	-				-0.1
4,453,153	+				-0.5
4,453,154	-				-0.3
4,453,308	+				-0.3
4,453,309	-				-1.4
4,453,309	-				+1.1
4,453,309	-				-0.9
4,453,309	-				+0.0
4,453,309	-				+0.6
4,453,339	-				+1.9
4,453,392	-				-0.0
4,453,705	+				-0.4
4,453,711	+				-1.7
4,453,711	+				-1.9
4,453,711	+				-0.2
4,453,718	+				-0.7
4,453,718	+				+1.4
4,453,719	-				-0.0
4,453,722	+				-1.7
4,453,722	+				-0.0
4,453,722	+				-0.8
4,453,722	+				-0.6
4,453,722	+				+1.4
4,453,723	-				-0.6
4,453,723	-				-0.6
4,453,723	-				-0.8
4,453,723	-				-0.9
4,453,754	+				+0.3
4,453,755	-				-0.9
4,453,755	-				-0.1
4,453,801	+				-3.4
4,453,801	+				-1.4
4,453,801	+				+0.7
4,453,802	-				-0.8
4,453,843	+				-0.9
4,453,843	+				-0.7
4,453,844	-				-0.7
4,453,844	-				-0.3
4,453,866	+				+0.5