Strain Fitness in Pseudomonas simiae WCS417 around PS417_20420

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
4,428,962	-		PS417_20415	0.37	+1.1
4,429,139	+				-1.7
4,429,222	+		PS417_20415	0.56	+0.2
4,429,242	+		PS417_20415	0.58	+0.3
4,429,242	+		PS417_20415	0.58	-0.0
4,429,246	+		PS417_20415	0.58	+0.3
4,429,302	-		PS417_20415	0.62	-0.7
4,429,855	-				+1.0
4,430,076	+		PS417_20420	0.13	+0.4
4,430,179	-				+0.4
4,430,282	+		PS417_20420	0.23	+0.4
4,430,282	+		PS417_20420	0.23	+0.8
4,430,495	+		PS417_20420	0.34	+1.4
4,430,498	-		PS417_20420	0.34	+0.3
4,430,509	-		PS417_20420	0.34	-0.3
4,430,777	+		PS417_20420	0.47	+0.6
4,430,902	+		PS417_20420	0.54	+1.0
4,431,238	+		PS417_20420	0.70	+0.0
4,431,489	+		PS417_20420	0.82	-0.0
4,431,606	+		PS417_20420	0.88	+1.0
4,431,672	+				-0.2
4,431,672	+				+0.5
4,431,723	+				-1.4
4,431,770	+				+1.2
4,431,779	+				-0.5
4,431,848	+				-1.3
4,431,848	+				-0.0
4,431,851	+				+1.1
4,431,874	-				+1.9
4,431,922	+				+0.1
4,431,922	+				-0.7
4,431,922	+				-0.2
4,431,923	-				+0.4
4,431,923	-				-0.6
4,431,991	-				+0.5
4,431,997	-				+0.3
4,432,029	-				+2.0
4,432,201	-				+0.0
4,432,282	+				-1.3
4,432,292	+				-0.4
4,432,293	-				-0.3
4,432,308	+				-0.2
4,432,372	+				-1.5
4,432,372	+				-1.2
4,432,372	+				-1.1
4,432,373	-				+0.2
4,432,373	-				+0.1
4,432,373	-				-1.0
4,432,375	+				+0.3
4,432,376	-				+0.0
4,432,376	-				-0.4
4,432,376	-				-0.0
4,432,376	-				-0.1
4,432,376	-				-0.7
4,432,379	+				+0.7
4,432,379	+				+0.9
4,432,379	+				+1.9
4,432,380	-				+0.7
4,432,380	-				-1.1
4,432,380	-				-1.6
4,432,380	-				+0.1
4,432,410	+				-0.3
4,432,411	-				+1.3
4,432,498	+		PS417_20425	0.14	-0.4
4,432,507	+		PS417_20425	0.15	-0.2
4,432,507	+		PS417_20425	0.15	+0.4
4,432,508	-		PS417_20425	0.16	+0.1
4,432,508	-		PS417_20425	0.16	+0.1
4,432,508	-				-1.6
4,432,528	+		PS417_20425	0.19	+0.1
4,432,538	-		PS417_20425	0.21	-0.2
4,432,538	-		PS417_20425	0.21	+0.0
4,432,594	+		PS417_20425	0.30	-0.9
4,432,605	-		PS417_20425	0.32	+0.7
4,432,616	+		PS417_20425	0.34	+0.3
4,432,616	+		PS417_20425	0.34	-1.7
4,432,617	-		PS417_20425	0.34	+0.2
4,432,617	-		PS417_20425	0.34	-0.4
4,432,647	-		PS417_20425	0.40	+0.0
4,432,655	+		PS417_20425	0.41	-0.2
4,432,655	+		PS417_20425	0.41	-0.6
4,432,655	+		PS417_20425	0.41	-0.3
4,432,655	+		PS417_20425	0.41	-0.7
4,432,655	+		PS417_20425	0.41	-0.0
4,432,656	-		PS417_20425	0.41	-0.3
4,432,656	-		PS417_20425	0.41	+0.0
4,432,656	-		PS417_20425	0.41	+0.2
4,432,656	-		PS417_20425	0.41	-0.4
4,432,656	-		PS417_20425	0.41	-2.6
4,432,671	+		PS417_20425	0.44	-0.1
4,432,671	+		PS417_20425	0.44	+0.3
4,432,672	-		PS417_20425	0.44	-1.4
4,432,700	-		PS417_20425	0.49	+0.3
4,432,804	+		PS417_20425	0.66	-0.7
4,432,804	+		PS417_20425	0.66	+0.2
4,432,804	+				-1.1
4,432,804	+		PS417_20425	0.66	+0.4
4,432,805	-		PS417_20425	0.67	-2.1
4,432,805	-		PS417_20425	0.67	-1.3