Strain Fitness in Pseudomonas simiae WCS417 around PS417_17300

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,777,244	-		PS417_17295	0.22	+1.0
3,777,268	+		PS417_17295	0.24	+2.2
3,777,268	+		PS417_17295	0.24	+1.9
3,777,268	+		PS417_17295	0.24	+2.0
3,777,268	+		PS417_17295	0.24	+0.9
3,777,269	-		PS417_17295	0.25	+0.2
3,777,273	-		PS417_17295	0.25	+1.9
3,777,538	-		PS417_17295	0.48	+1.0
3,777,670	-		PS417_17295	0.59	+1.7
3,777,670	-		PS417_17295	0.59	+1.3
3,777,947	+		PS417_17295	0.82	+1.0
3,777,947	+		PS417_17295	0.82	+1.8
3,778,208	-				+0.6
3,778,318	+		PS417_17300	0.13	+1.6
3,778,318	+		PS417_17300	0.13	+0.8
3,778,318	+		PS417_17300	0.13	+0.7
3,778,562	-		PS417_17300	0.30	+0.8
3,778,684	+		PS417_17300	0.39	+0.7
3,778,684	+		PS417_17300	0.39	+1.2
3,778,684	+		PS417_17300	0.39	+0.9
3,778,684	+		PS417_17300	0.39	-0.8
3,778,859	+		PS417_17300	0.51	+1.0
3,779,207	+		PS417_17300	0.76	+1.4
3,779,373	+		PS417_17300	0.87	+0.9
3,779,399	-		PS417_17300	0.89	+0.2
3,779,507	+				+1.8
3,779,551	+				-0.8
3,779,551	+				+0.9
3,779,552	-				+0.6
3,779,708	-				-0.2
3,779,725	+				-0.9
3,779,747	+				+0.2
3,779,748	-				-1.2
3,779,748	-				-0.2
3,779,880	+				-0.7
3,779,881	-				+0.1
3,779,881	-				-0.2
3,779,914	+				+1.4
3,779,914	+				+0.1
3,779,914	+				-1.2
3,779,914	+				+0.1
3,779,915	-				+0.5
3,779,915	-				-0.2
3,779,915	-				-0.4
3,779,968	+				+0.3
3,779,968	+				+0.5
3,779,969	-				+0.6
3,779,969	-				-0.3
3,780,004	-				-0.4
3,780,058	+				+1.4
3,780,059	-				+1.4
3,780,059	-				+0.1
3,780,059	-				-0.2
3,780,069	+				+1.0
3,780,070	-				-0.8
3,780,070	-				-0.6
3,780,134	+				-0.6
3,780,135	-				-0.4
3,780,329	-		PS417_17305	0.85	-0.1
3,780,476	-				-0.1
3,780,483	+				-1.0