Strain Fitness in Pseudomonas simiae WCS417 around PS417_17290

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,772,776	+				-2.2
3,772,830	+				+0.5
3,772,875	-				-0.8
3,772,875	-				+1.5
3,772,890	-				-0.7
3,772,891	+				-0.9
3,772,945	+				+0.2
3,772,945	+				-0.6
3,772,946	-				+1.0
3,772,949	+				+1.4
3,772,950	-				-1.3
3,772,950	-				+0.0
3,772,950	-				-0.4
3,773,141	+				+1.3
3,773,268	+		PS417_17285	0.26	-0.9
3,773,268	+		PS417_17285	0.26	-0.5
3,773,296	-		PS417_17285	0.33	-0.5
3,773,296	-		PS417_17285	0.33	-1.6
3,773,357	+				+0.8
3,773,357	+		PS417_17285	0.47	-0.2
3,773,357	+		PS417_17285	0.47	-1.4
3,773,357	+		PS417_17285	0.47	-1.6
3,773,357	+		PS417_17285	0.47	-0.8
3,773,552	+				+0.4
3,773,552	+				-0.2
3,773,552	+				-0.8
3,773,575	+				-0.3
3,773,594	+				+0.1
3,773,594	+				-1.5
3,773,595	-				-0.9
3,773,595	-				-0.5
3,773,595	-				+1.3
3,773,595	-				+0.1
3,773,635	+				+0.8
3,773,636	-				+0.1
3,773,648	+				-0.7
3,773,649	-				+0.3
3,773,649	-				+0.4
3,773,649	-				+0.4
3,773,652	+				+0.8
3,773,652	+				+0.5
3,773,653	-				+1.3
3,773,653	-				+0.2
3,773,678	-				+0.5
3,773,678	-				+1.0
3,773,830	-				+1.2
3,773,924	+				+0.8
3,773,925	-				+1.4
3,773,966	+				+1.1
3,773,966	+				+0.9
3,773,967	-				+0.7
3,773,967	-				+0.7
3,773,967	-				+1.2
3,773,967	-				+0.5
3,773,967	-				+0.9
3,773,968	+				+0.9
3,773,972	+				+0.9
3,773,972	+				+1.5
3,773,972	+				+0.8
3,773,972	+				+1.2
3,773,973	-				+0.8
3,774,167	+		PS417_17290	0.12	+1.5
3,774,167	+		PS417_17290	0.12	+1.6
3,774,167	+		PS417_17290	0.12	+1.1
3,775,097	-		PS417_17290	0.41	-0.0
3,775,407	-		PS417_17290	0.51	+0.8
3,775,407	-		PS417_17290	0.51	+1.1
3,775,416	+		PS417_17290	0.51	+0.9
3,775,416	+		PS417_17290	0.51	+1.0
3,775,700	+		PS417_17290	0.60	+1.1
3,775,906	-		PS417_17290	0.66	+0.2
3,775,971	+		PS417_17290	0.68	+0.9
3,775,971	+		PS417_17290	0.68	+1.6
3,775,972	-				-1.6
3,775,972	-		PS417_17290	0.68	+0.8
3,776,029	-		PS417_17290	0.70	+1.1
3,776,122	-		PS417_17290	0.73	+0.4
3,776,312	+		PS417_17290	0.79	+2.8
3,776,313	-				-0.6
3,776,313	-		PS417_17290	0.79	+1.0
3,776,313	-		PS417_17290	0.79	+0.6
3,776,339	+		PS417_17290	0.80	+0.7
3,776,394	+		PS417_17290	0.81	+1.0
3,776,519	+		PS417_17290	0.85	+0.8
3,776,770	+				+0.8
3,776,770	+				+0.4
3,776,771	-				+2.1
3,776,953	+				+1.8
3,777,244	-		PS417_17295	0.22	+1.0
3,777,268	+		PS417_17295	0.24	+2.2
3,777,268	+		PS417_17295	0.24	+1.9
3,777,268	+		PS417_17295	0.24	+2.0
3,777,268	+		PS417_17295	0.24	+0.9
3,777,269	-		PS417_17295	0.25	+0.2
3,777,273	-		PS417_17295	0.25	+1.9
3,777,538	-		PS417_17295	0.48	+1.0
3,777,670	-		PS417_17295	0.59	+1.7
3,777,670	-		PS417_17295	0.59	+1.3
3,777,947	+		PS417_17295	0.82	+1.0
3,777,947	+		PS417_17295	0.82	+1.8