Strain Fitness in Pseudomonas simiae WCS417 around PS417_16665

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,639,641	+		PS417_16655	0.30	+0.4
3,639,641	+		PS417_16655	0.30	-0.0
3,639,642	-		PS417_16655	0.30	-1.3
3,639,642	-		PS417_16655	0.30	-1.0
3,639,642	-				-0.9
3,639,642	-		PS417_16655	0.30	+0.0
3,639,695	+		PS417_16655	0.36	+0.6
3,639,695	+		PS417_16655	0.36	-0.3
3,639,695	+		PS417_16655	0.36	-1.3
3,639,695	+		PS417_16655	0.36	-0.6
3,639,696	-		PS417_16655	0.36	-0.8
3,639,857	+		PS417_16655	0.56	-0.9
3,639,858	-		PS417_16655	0.56	-0.1
3,640,256	+				-0.5
3,640,256	+				-0.9
3,640,320	+				+0.0
3,640,320	+				-0.5
3,640,320	+				-0.1
3,640,321	-				-0.5
3,640,321	-				-1.4
3,640,321	-				-0.3
3,640,372	+		PS417_16660	0.13	-0.8
3,640,612	-				-0.9
3,640,639	-		PS417_16665	0.14	-1.0
3,640,991	+				-0.7
3,640,992	-				-0.1
3,640,992	-				+1.7
3,641,024	-				+1.2
3,641,024	-				+0.3
3,641,027	+				-0.4
3,641,027	+				+1.6
3,641,028	-				-1.1
3,641,033	+				-0.2
3,641,169	-		PS417_16675	0.10	+0.1
3,641,169	-		PS417_16675	0.10	+0.0
3,641,169	-		PS417_16675	0.10	+0.3
3,641,171	+		PS417_16675	0.11	+0.3
3,641,171	+		PS417_16675	0.11	-0.2
3,641,172	-		PS417_16675	0.11	-1.9
3,641,362	-		PS417_16675	0.47	+0.8
3,641,404	+		PS417_16675	0.55	+0.3
3,641,404	+		PS417_16675	0.55	-0.4
3,641,404	+				+2.4
3,641,405	-		PS417_16675	0.56	+0.1
3,641,405	-		PS417_16675	0.56	+0.6
3,641,552	+		PS417_16675	0.84	-0.2
3,641,552	+		PS417_16675	0.84	-0.4
3,641,649	-				-0.5