Strain Fitness in Pseudomonas simiae WCS417 around PS417_15165

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,322,054	+		PS417_15160	0.79	-0.2
3,322,289	+				-0.2
3,322,290	-				+0.5
3,322,290	-				-0.7
3,322,306	+				+0.2
3,322,306	+				+1.0
3,322,351	-				+0.5
3,322,458	-				-0.0
3,322,459	+				+0.8
3,322,459	+				-0.1
3,322,459	+				-0.8
3,322,460	-				-0.1
3,322,460	-				+1.9
3,322,679	-				+0.5
3,322,805	-		PS417_15165	0.20	-0.2
3,322,968	+				+0.4
3,322,969	-		PS417_15165	0.35	-0.1
3,322,994	+		PS417_15165	0.37	-1.0
3,322,994	+		PS417_15165	0.37	-0.6
3,323,542	+		PS417_15165	0.86	-1.0
3,323,694	+				-1.5
3,323,695	-				+1.8
3,323,752	+				-0.2
3,323,879	-				+1.5
3,323,905	+				+0.1
3,323,905	+				-1.1
3,324,001	-		PS417_15170	0.11	-0.8
3,324,095	+		PS417_15170	0.17	-0.5
3,324,124	+		PS417_15170	0.19	-0.2
3,324,214	+				-0.8