Strain Fitness in Pseudomonas simiae WCS417 around PS417_13715

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
3,016,058	+		PS417_13705	0.81	-0.4
3,016,270	-				-0.5
3,016,328	+				+1.1
3,016,451	+				+0.1
3,016,451	+				-0.3
3,016,452	-				-0.5
3,016,458	+				+0.9
3,016,459	-				-0.5
3,016,461	+				-0.2
3,016,461	+				-1.1
3,016,462	-				-0.4
3,016,537	-		PS417_13710	0.21	-0.2
3,016,556	-		PS417_13710	0.27	+1.2
3,016,563	+		PS417_13710	0.29	-1.2
3,016,564	-		PS417_13710	0.30	-1.8
3,016,766	+				+0.3
3,016,767	-				-1.2
3,016,767	-				+0.0
3,016,949	+				-0.1
3,016,949	+				+1.3
3,016,957	+				+0.4
3,016,957	+				-0.1
3,016,957	+				+0.0
3,016,957	+				-0.3
3,016,958	-				+2.9
3,016,960	-				+2.1
3,016,991	+				+0.7
3,016,991	+				-0.4
3,016,991	+				+0.3
3,016,995	+				+0.0
3,017,014	+		PS417_13715	0.14	+0.1
3,017,014	+		PS417_13715	0.14	+1.7
3,017,018	+		PS417_13715	0.16	-0.2
3,017,018	+				+1.1
3,017,018	+		PS417_13715	0.16	+1.5
3,017,038	+		PS417_13715	0.25	-0.3
3,017,125	+		PS417_13715	0.64	+0.6
3,017,126	-		PS417_13715	0.64	+0.5
3,017,259	-				+0.7
3,017,259	-				-0.7
3,017,337	+		PS417_13720	0.23	+0.2
3,017,396	+		PS417_13720	0.34	-0.8
3,017,397	-		PS417_13720	0.34	+0.1
3,017,397	-		PS417_13720	0.34	+0.1
3,017,397	-		PS417_13720	0.34	+0.0
3,017,682	+		PS417_13720	0.90	-0.1
3,017,726	+				-0.3
3,017,756	+				-0.1
3,017,774	-				-0.9
3,017,801	+		PS417_13725	0.13	-1.2
3,017,945	+		PS417_13725	0.45	-1.4
3,017,945	+		PS417_13725	0.45	-0.7
3,017,946	-		PS417_13725	0.46	-0.1
3,018,082	-		PS417_13725	0.76	-0.7
3,018,111	+		PS417_13725	0.83	-0.6
3,018,111	+		PS417_13725	0.83	+1.2