Strain Fitness in Pseudomonas simiae WCS417 around PS417_13190

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
2,881,239	+		PS417_13185	0.38	-0.6
2,881,589	+		PS417_13185	0.63	-2.0
2,881,736	+		PS417_13185	0.73	-0.8
2,882,014	-				+0.6
2,882,042	+				+0.3
2,882,098	+				-0.0
2,882,166	+				-1.7
2,882,166	+				-0.3
2,882,166	+				-0.3
2,882,167	-				-0.8
2,882,171	-				-0.5
2,882,185	-				-0.3
2,882,188	+				-0.4
2,882,189	-				-0.2
2,882,189	-				-0.7
2,882,457	+		PS417_13190	0.11	-0.3
2,882,511	-		PS417_13190	0.13	-0.6
2,882,587	+		PS417_13190	0.15	-1.0
2,882,692	+		PS417_13190	0.18	-2.2
2,882,992	+		PS417_13190	0.28	+1.0
2,883,007	+		PS417_13190	0.28	-1.8
2,883,107	-		PS417_13190	0.31	-0.9
2,883,277	+		PS417_13190	0.37	+0.8
2,883,277	+		PS417_13190	0.37	-1.5
2,883,278	-		PS417_13190	0.37	-0.3
2,883,299	-		PS417_13190	0.37	-1.0
2,883,350	+		PS417_13190	0.39	-2.0
2,883,351	-		PS417_13190	0.39	-1.7
2,883,550	+		PS417_13190	0.45	-1.5
2,883,551	-		PS417_13190	0.45	-0.9
2,883,551	-		PS417_13190	0.45	-0.6
2,883,908	+		PS417_13190	0.57	-0.4
2,883,909	-		PS417_13190	0.57	-1.3
2,884,301	-		PS417_13190	0.69	-0.4
2,884,529	+		PS417_13190	0.76	-1.7
2,884,813	+		PS417_13190	0.85	-0.1
2,884,825	+		PS417_13190	0.85	-1.4
2,884,826	-		PS417_13190	0.85	-1.2
2,884,826	-		PS417_13190	0.85	-0.6
2,884,904	+		PS417_13190	0.88	-1.2
2,885,053	+				-1.1
2,885,053	+				-1.9
2,885,053	+				-1.5
2,885,053	+				-0.5
2,885,053	+				-1.1
2,885,053	+				-0.5
2,885,053	+				-0.6
2,885,053	+				+0.7
2,885,053	+				-1.1
2,885,053	+				-0.2
2,885,054	-				-0.0
2,885,180	-				+0.2
2,885,656	+		PS417_13195	0.28	-0.7
2,885,656	+				-0.5
2,885,657	-		PS417_13195	0.28	-1.7
2,885,912	-				-0.3
2,885,917	+		PS417_13195	0.49	-1.1