Strain Fitness in Pseudomonas simiae WCS417 around PS417_12855

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
2,810,788	+		PS417_12845	0.27	-0.4
2,811,085	-		PS417_12845	0.76	-0.1
2,811,099	+		PS417_12845	0.79	-0.4
2,811,100	-		PS417_12845	0.79	+0.5
2,811,438	-		PS417_12850	0.54	-1.8
2,811,653	-				-0.1
2,811,655	+				+0.1
2,811,655	+				+0.1
2,811,656	-				-0.1
2,811,703	+				-2.1
2,811,703	+				-2.1
2,812,166	-		PS417_12855	0.41	-1.8
2,812,387	-		PS417_12855	0.59	-1.9
2,812,390	+		PS417_12855	0.59	-1.8
2,812,391	-		PS417_12855	0.59	-1.0
2,812,453	-		PS417_12855	0.64	-2.6
2,812,453	-		PS417_12855	0.64	-1.3
2,812,453	-		PS417_12855	0.64	-1.4
2,812,910	+				-0.2
2,812,911	-				-0.7
2,812,968	-				-0.7
2,812,978	-				+1.6
2,812,978	-				+0.2
2,813,021	+				-0.7
2,813,021	+				-0.3
2,813,030	+				+1.4
2,813,030	+				+0.5
2,813,031	-				-1.9
2,813,031	-				+0.9
2,813,031	-				-2.1
2,813,031	-				-0.0
2,813,293	+		PS417_12860	0.36	-0.5
2,813,692	-				-0.1
2,813,724	+				+0.6
2,813,776	-				+0.4
2,813,776	-				+0.6
2,813,776	-				+0.7