Strain Fitness in Pseudomonas simiae WCS417 around PS417_10275

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
2,194,248	-				+0.3
2,194,263	-				+0.2
2,194,330	-		PS417_10265	0.26	-1.1
2,194,463	-		PS417_10265	0.69	+0.2
2,194,463	-		PS417_10265	0.69	+0.4
2,194,469	-		PS417_10265	0.71	-0.4
2,194,692	+		PS417_10270	0.20	-0.9
2,194,852	-				+0.3
2,194,884	+		PS417_10270	0.48	-0.2
2,195,040	+		PS417_10270	0.72	-0.0
2,195,097	+		PS417_10270	0.80	+0.1
2,195,097	+		PS417_10270	0.80	-0.1
2,195,281	-				+0.1
2,195,281	-				-0.2
2,195,281	-				-0.3
2,195,651	+		PS417_10275	0.32	-0.3
2,195,838	+		PS417_10275	0.46	-1.4
2,196,323	+		PS417_10275	0.83	-1.0
2,196,571	+				-0.9
2,196,686	+				+0.3
2,196,851	-		PS417_10280	0.13	+0.3
2,196,851	-		PS417_10280	0.13	-0.8
2,196,857	+		PS417_10280	0.13	+0.7
2,196,958	-		PS417_10280	0.18	-0.1
2,196,958	-				-2.2
2,197,313	-		PS417_10280	0.35	-0.3
2,197,370	+		PS417_10280	0.37	-0.5