Strain Fitness in Pseudomonas simiae WCS417 around PS417_00710

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X
146,594	+				-0.1
146,647	+				+0.3
146,647	+				+0.2
146,647	+				+0.2
146,648	-				-0.8
146,648	-				+0.7
146,964	-				+0.8
146,976	-				-0.1
146,976	-				-0.4
147,053	+				-0.8
147,072	-				+0.3
147,148	+				+1.1
147,186	-		PS417_00705	0.18	+1.1
147,329	+		PS417_00705	0.53	+2.3
147,330	-		PS417_00705	0.53	+0.5
147,565	+				-0.3
147,566	-				+0.1
147,566	-				-0.2
147,604	+				-0.1
147,604	+				-0.4
147,605	-				+1.5
147,605	-				-0.6
147,658	+				-1.1
147,658	+				+1.5
147,658	+				+0.0
147,658	+				-0.3
147,659	-				+0.3
147,659	-				-0.4
147,659	-				+0.8
147,659	-				-1.5
147,659	-				-0.6
147,706	+				-1.2
147,707	-				-1.0
147,778	+		PS417_00710	0.12	+0.2
147,778	+		PS417_00710	0.12	+1.6
147,779	-		PS417_00710	0.12	-1.5
147,857	-		PS417_00710	0.16	+0.3
147,857	-		PS417_00710	0.16	+0.0
147,913	-		PS417_00710	0.19	+0.3
148,206	-		PS417_00710	0.33	+0.0
148,209	+		PS417_00710	0.33	+0.6
148,210	-		PS417_00710	0.33	+0.6
148,210	-		PS417_00710	0.33	-1.1
148,212	+		PS417_00710	0.33	-0.5
148,233	+		PS417_00710	0.34	+0.3
148,234	-		PS417_00710	0.34	-0.2
148,279	+		PS417_00710	0.37	+2.0
148,279	+		PS417_00710	0.37	-1.9
148,279	+		PS417_00710	0.37	+1.0
148,279	+		PS417_00710	0.37	-0.0
148,279	+		PS417_00710	0.37	+0.0
148,280	-		PS417_00710	0.37	+0.0
148,280	-		PS417_00710	0.37	-0.4
148,280	-		PS417_00710	0.37	+0.3
148,627	+		PS417_00710	0.53	-0.2
148,823	-		PS417_00710	0.63	-1.2
149,300	-		PS417_00710	0.86	-0.3
149,595	-				-0.3
149,657	+		PS417_00715	0.30	-1.7
149,657	+		PS417_00715	0.30	-0.4
149,657	+		PS417_00715	0.30	+1.1
149,658	-		PS417_00715	0.30	+0.5
149,658	-				+0.5
149,658	-		PS417_00715	0.30	+1.1
149,661	+		PS417_00715	0.31	+0.1
149,661	+		PS417_00715	0.31	-1.6
149,661	+		PS417_00715	0.31	+1.0
149,661	+		PS417_00715	0.31	-3.9
149,662	-		PS417_00715	0.32	-0.5
149,662	-		PS417_00715	0.32	+0.5
149,662	-		PS417_00715	0.32	-0.1
149,662	-		PS417_00715	0.32	+0.7
149,662	-		PS417_00715	0.32	+0.1
149,662	-		PS417_00715	0.32	+2.8
149,662	-		PS417_00715	0.32	-2.3
149,662	-		PS417_00715	0.32	+0.7
149,709	+		PS417_00715	0.54	-0.3
149,891	+		PS417_00720	0.10	+0.2
149,891	+		PS417_00720	0.10	-0.7
149,891	+				-0.5
149,891	+		PS417_00720	0.10	-0.3
149,891	+		PS417_00720	0.10	-1.2
149,892	-		PS417_00720	0.10	+0.9
149,892	-		PS417_00720	0.10	+0.9
149,892	-		PS417_00720	0.10	-0.9
149,892	-		PS417_00720	0.10	-1.2
149,894	+		PS417_00720	0.10	-0.5
149,894	+		PS417_00720	0.10	+0.9
149,894	+		PS417_00720	0.10	-0.1
149,894	+		PS417_00720	0.10	-0.6
149,894	+		PS417_00720	0.10	+0.5