Strain Fitness in Pseudomonas simiae WCS417 around PS417_04590

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,015,491	-		PS417_04585	0.76	-0.6
1,015,919	+				+1.7
1,015,919	+				+0.1
1,015,919	+				+1.2
1,015,920	-				+0.6
1,015,920	-				+0.6
1,015,985	+				-0.1
1,015,986	-				-0.8
1,016,007	+				+0.4
1,016,008	-				-1.0
1,016,090	+				-0.0
1,016,090	+				-2.1
1,016,091	-				-0.1
1,016,091	-				-0.3
1,016,357	+		PS417_04590	0.26	+0.2
1,016,466	-		PS417_04590	0.39	+0.2
1,016,473	+		PS417_04590	0.40	-0.7
1,016,473	+		PS417_04590	0.40	+1.4
1,016,473	+		PS417_04590	0.40	+0.0
1,016,474	-		PS417_04590	0.40	-1.4
1,016,474	-		PS417_04590	0.40	-0.5
1,016,474	-		PS417_04590	0.40	-0.8
1,016,575	+		PS417_04590	0.51	-0.8
1,016,789	+		PS417_04590	0.76	-0.6
1,016,876	+		PS417_04590	0.86	-0.4
1,016,877	-		PS417_04590	0.86	-1.2
1,016,887	+		PS417_04590	0.87	+0.1
1,016,887	+		PS417_04590	0.87	-0.7
1,016,888	-		PS417_04590	0.87	-0.1
1,016,964	+				-0.2
1,016,964	+				+0.2
1,016,997	+				-0.9
1,016,998	-				+0.9
1,017,018	-				-0.3
1,017,053	-				-0.6
1,017,055	+				-0.1
1,017,055	+				-0.4
1,017,056	-				-1.0
1,017,056	-				-0.8
1,017,487	+				+0.1
1,017,490	+				+1.2
1,017,491	-				+0.9
1,017,599	+				-3.0
1,017,724	+				-0.3
1,017,724	+				-0.2
1,017,937	+		PS417_04595	0.29	-0.6