Strain Fitness in Pseudomonas simiae WCS417 around PS417_27835

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
6,001,195	+				+0.5
6,001,198	+				-0.6
6,001,198	+				-1.4
6,001,199	-				-0.8
6,001,199	-				-0.1
6,001,228	-				-0.9
6,001,265	-		PS417_27835	0.14	-3.7
6,001,265	-		PS417_27835	0.14	-2.4
6,001,297	+		PS417_27835	0.22	-1.2
6,001,298	-		PS417_27835	0.22	-0.8
6,001,367	+		PS417_27835	0.40	-2.3
6,001,496	-		PS417_27835	0.74	-2.2
6,001,496	-				+0.2
6,001,496	-		PS417_27835	0.74	-1.3
6,001,666	+				-0.0
6,001,667	-				+0.0
6,001,836	-		PS417_27840	0.25	-0.4
6,001,858	-		PS417_27840	0.28	-0.4
6,001,860	+		PS417_27840	0.28	-0.2
6,001,861	-		PS417_27840	0.28	-0.5
6,002,076	+		PS417_27840	0.57	-0.3
6,002,077	-		PS417_27840	0.57	+2.4
6,002,085	+		PS417_27840	0.58	-0.6
6,002,086	-		PS417_27840	0.59	+0.8
6,002,086	-		PS417_27840	0.59	-0.0
6,002,137	+		PS417_27840	0.65	+1.7
6,002,138	-		PS417_27840	0.66	+1.2
6,002,138	-		PS417_27840	0.66	+0.6
6,002,391	+				-0.5
6,002,391	+				-0.4
6,002,391	+				-0.8
6,002,392	-				-0.1
6,002,392	-				-0.2
6,002,589	+				+0.7