Strain Fitness in Pseudomonas simiae WCS417 around PS417_27195

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
5,870,230	+		PS417_27190	0.28	-0.1
5,870,230	+		PS417_27190	0.28	-0.5
5,870,230	+				-1.0
5,870,230	+		PS417_27190	0.28	-0.2
5,870,231	-		PS417_27190	0.28	-1.5
5,870,267	+		PS417_27190	0.32	-0.4
5,870,268	-		PS417_27190	0.32	+0.6
5,870,623	+		PS417_27190	0.68	-1.0
5,870,624	-		PS417_27190	0.68	-2.0
5,870,624	-		PS417_27190	0.68	+0.8
5,870,645	+		PS417_27190	0.70	-1.4
5,870,667	+		PS417_27190	0.73	-0.6
5,870,816	+		PS417_27190	0.88	+0.2
5,870,816	+		PS417_27190	0.88	-1.4
5,870,925	-				+1.0
5,870,925	-				-1.0
5,870,925	-				+0.3
5,870,925	-				+0.4
5,871,051	+				+0.2
5,871,051	+				-0.2
5,871,051	+				-0.3
5,871,055	+				-0.5
5,871,055	+				+0.5
5,871,948	+		PS417_27195	0.69	-3.3
5,872,192	-		PS417_27195	0.87	-1.9
5,872,316	-				-1.5
5,872,316	-				-2.2
5,872,466	+				+1.4
5,872,466	+				-0.4
5,872,466	+				-0.1
5,872,466	+				-0.7
5,872,467	-				-0.1
5,872,467	-				-0.5
5,872,467	-				-0.0
5,872,470	+				+0.6
5,872,470	+				-0.8
5,872,471	-				-0.2
5,872,488	-				-0.4
5,872,492	+				+0.0
5,872,493	-				-1.5
5,872,511	-				-0.1
5,872,511	-				-1.9
5,872,511	-				+1.3
5,872,534	-				-0.0
5,872,544	+				+1.4
5,872,544	+				-0.5
5,872,645	+		PS417_27200	0.13	+0.2
5,872,646	-		PS417_27200	0.13	-0.0
5,872,995	+		PS417_27200	0.44	+1.0
5,872,995	+		PS417_27200	0.44	+1.4
5,872,996	-		PS417_27200	0.44	-1.8