Strain Fitness in Pseudomonas simiae WCS417 around PS417_27155

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
5,861,668	-		PS417_27145	0.19	-0.2
5,861,709	+		PS417_27145	0.25	-0.7
5,861,835	+		PS417_27145	0.45	+0.0
5,861,836	-		PS417_27145	0.45	-0.0
5,861,836	-		PS417_27145	0.45	+0.4
5,861,861	+		PS417_27145	0.49	-0.7
5,861,861	+		PS417_27145	0.49	-0.3
5,861,862	-		PS417_27145	0.49	+2.2
5,861,862	-		PS417_27145	0.49	-0.4
5,861,865	+		PS417_27145	0.50	-0.2
5,861,865	+		PS417_27145	0.50	-0.3
5,861,865	+		PS417_27145	0.50	-1.8
5,861,865	+		PS417_27145	0.50	+0.8
5,861,865	+		PS417_27145	0.50	+0.2
5,861,866	-		PS417_27145	0.50	+0.3
5,861,866	-		PS417_27145	0.50	-0.7
5,861,866	-		PS417_27145	0.50	+0.3
5,861,866	-		PS417_27145	0.50	-0.1
5,861,866	-		PS417_27145	0.50	-1.5
5,862,061	-		PS417_27145	0.80	-0.3
5,862,092	+		PS417_27145	0.85	-1.5
5,862,135	+				-1.0
5,862,135	+				+1.4
5,862,135	+				-1.4
5,862,135	+				-0.9
5,862,136	-				+0.2
5,862,136	-				+0.7
5,862,136	-				-0.3
5,862,136	-				-0.8
5,862,136	-				-0.5
5,862,147	+				-0.7
5,862,147	+				-0.6
5,862,147	+				-0.3
5,862,159	+				-0.3
5,862,160	-				+0.4
5,862,160	-				-0.2
5,862,160	-				-0.2
5,862,186	+				-0.0
5,862,187	-				+0.4
5,862,187	-				-0.5
5,862,196	-				+0.1
5,862,498	+				-0.2
5,862,499	-				-0.6
5,862,499	-				+0.6
5,862,499	-				-0.1
5,862,499	-				-1.6
5,862,504	+				+0.3
5,862,505	-				-1.0
5,862,505	-				+0.2
5,862,505	-				-0.8
5,862,508	-				-0.5
5,862,508	-				+0.8
5,862,543	+				+1.0
5,862,543	+				+0.5
5,862,544	-				-0.8
5,863,025	-		PS417_27155	0.60	-1.5
5,863,240	+		PS417_27155	0.86	-1.1
5,863,448	+		PS417_27160	0.13	+0.5
5,863,448	+		PS417_27160	0.13	+0.6
5,863,449	-		PS417_27160	0.13	-1.3
5,863,449	-		PS417_27160	0.13	-0.4
5,863,449	-		PS417_27160	0.13	+0.0
5,863,658	+		PS417_27160	0.40	-1.1
5,863,658	+		PS417_27160	0.40	-0.3
5,863,659	-		PS417_27160	0.40	-1.0
5,863,709	+		PS417_27160	0.46	-0.1
5,863,710	-		PS417_27160	0.46	-1.3
5,863,721	+		PS417_27160	0.48	+0.3
5,864,029	-		PS417_27160	0.87	+1.2
5,864,080	+				-0.1
5,864,080	+				+0.3
5,864,080	+				-0.2
5,864,080	+				-1.0
5,864,081	-				+0.6
5,864,081	-				-1.8
5,864,126	+				+0.4
5,864,126	+				+0.8
5,864,126	+				-0.4
5,864,127	-				-0.1
5,864,144	+				+2.5
5,864,144	+				-0.2
5,864,145	-				+1.6
5,864,207	+				-0.8
5,864,207	+				+2.2
5,864,208	-				-0.8
5,864,208	-				-0.1
5,864,310	+		PS417_27165	0.15	-0.0
5,864,310	+		PS417_27165	0.15	-0.3
5,864,311	-		PS417_27165	0.15	-0.3