Strain Fitness in Pseudomonas simiae WCS417 around PS417_25710

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
5,549,926	+				-1.0
5,550,092	+		PS417_25705	0.30	-0.1
5,550,251	+		PS417_25705	0.53	-0.3
5,550,310	-		PS417_25705	0.61	-0.5
5,550,589	+				+1.8
5,550,589	+				+0.7
5,550,589	+				-0.6
5,550,590	-				-0.5
5,550,590	-				-0.1
5,550,590	-				+1.8
5,550,593	+				+0.2
5,550,602	-				-0.7
5,550,673	+				-1.0
5,550,674	-				-0.2
5,550,674	-				-0.7
5,550,702	+				-1.0
5,550,709	-				-1.7
5,550,715	+				+0.1
5,550,716	-				-1.3
5,550,738	+				+0.1
5,550,748	+				-0.4
5,550,854	+		PS417_25710	0.13	-3.9
5,550,854	+		PS417_25710	0.13	-2.8
5,551,685	+		PS417_25715	0.10	-2.7
5,551,686	-		PS417_25715	0.11	-1.7
5,551,693	+				-2.0
5,551,711	+		PS417_25715	0.13	-0.5
5,551,711	+		PS417_25715	0.13	-1.7
5,551,711	+		PS417_25715	0.13	-1.9
5,551,712	-		PS417_25715	0.13	-4.9
5,551,712	-		PS417_25715	0.13	-1.1
5,552,230	+		PS417_25715	0.62	-1.5
5,552,231	-		PS417_25715	0.62	-4.1