Strain Fitness in Pseudomonas simiae WCS417 around PS417_24935

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
5,403,885	-				+0.2
5,403,944	+				+0.3
5,403,944	+				+0.6
5,403,945	-				-0.3
5,403,977	+				+1.1
5,404,036	-				+0.2
5,404,057	+				+2.0
5,404,057	+				+0.8
5,404,080	-				-0.4
5,404,089	+				+1.3
5,404,090	-				+1.3
5,404,123	+				-0.1
5,404,123	+				-3.5
5,404,124	-				+0.1
5,404,124	-				-1.6
5,404,124	-				-0.2
5,404,124	-				-0.4
5,404,160	-				+0.3
5,404,229	+				+0.8
5,404,230	-				+0.5
5,404,253	+				+1.4
5,404,254	-				-2.1
5,404,291	-				-0.1
5,404,370	-				-1.6
5,404,391	+				+0.8
5,404,391	+				-0.1
5,404,392	-				+0.9
5,404,392	-				-0.5
5,404,404	+				+1.4
5,404,404	+				+1.0
5,404,405	-				-0.0
5,404,542	-				+0.5
5,404,542	-				-0.6
5,404,611	-				-0.5
5,404,692	+				+0.9
5,404,693	-				+0.0
5,404,789	-				-0.9
5,404,789	-				+0.4
5,404,832	-				+0.4
5,404,832	-				+0.5
5,405,211	+		PS417_24935	0.87	-1.3
5,405,234	-				+0.4
5,405,416	+				+0.5
5,405,417	-				-1.2
5,405,437	+				-0.2
5,405,437	+				+0.5
5,405,437	+				+1.6
5,405,437	+				+3.1
5,405,437	+				-0.7
5,405,437	+				+0.6
5,405,438	-				-0.2
5,405,438	-				+0.9
5,405,438	-				-0.0
5,405,438	-				+1.2
5,405,438	-				+1.4
5,405,438	-				-1.4
5,405,438	-				+0.3
5,405,438	-				+0.3
5,405,438	-				-0.0
5,405,438	-				+0.6
5,405,499	+				+0.5
5,405,680	+				-0.3
5,405,821	+				+0.6
5,405,929	+				+0.2
5,405,929	+				-1.2
5,405,930	-				+0.9
5,405,932	+				-0.2
5,406,043	+				-0.7
5,406,044	-				+0.5
5,406,112	+				+0.3
5,406,172	-				-0.0
5,406,181	-				-0.8
5,406,218	+				+0.9