Strain Fitness in Pseudomonas simiae WCS417 around PS417_24605

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
5,339,023	+				+0.8
5,339,023	+				+0.2
5,339,023	+				-0.1
5,339,024	-				+0.9
5,339,029	-				-1.7
5,339,029	-				-0.4
5,339,029	-				-0.2
5,339,078	+				-0.3
5,339,207	+				+0.4
5,339,208	-				-3.7
5,339,211	+				-0.4
5,339,211	+				+0.1
5,339,211	+				-1.1
5,339,211	+				+0.1
5,339,212	-				-0.1
5,339,212	-				+0.0
5,339,212	-				+0.0
5,339,212	-				+0.0
5,339,374	+		PS417_24600	0.22	-1.3
5,339,703	+		PS417_24600	0.63	-0.4
5,339,703	+		PS417_24600	0.63	-1.0
5,339,703	+		PS417_24600	0.63	-0.9
5,339,820	+		PS417_24600	0.77	-0.6
5,339,913	+		PS417_24600	0.89	-0.6
5,339,913	+		PS417_24600	0.89	-0.6
5,339,913	+		PS417_24600	0.89	+1.0
5,339,914	-		PS417_24600	0.89	-0.5
5,340,003	+				+1.4
5,340,003	+				-0.6
5,340,081	+		PS417_24605	0.10	-1.0
5,340,197	+		PS417_24605	0.29	-0.8
5,340,384	+		PS417_24605	0.59	-1.1
5,340,384	+		PS417_24605	0.59	-0.4
5,340,384	+		PS417_24605	0.59	-0.2