Strain Fitness in Pseudomonas simiae WCS417 around PS417_24600

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
5,338,218	+		PS417_24595	0.70	+0.4
5,338,218	+		PS417_24595	0.70	-1.1
5,338,251	+		PS417_24595	0.72	-0.6
5,338,251	+		PS417_24595	0.72	-0.0
5,338,251	+				-0.1
5,338,252	-		PS417_24595	0.72	-0.1
5,338,252	-		PS417_24595	0.72	+0.2
5,338,252	-		PS417_24595	0.72	-0.1
5,338,252	-		PS417_24595	0.72	-0.1
5,338,273	-		PS417_24595	0.73	-0.2
5,338,273	-		PS417_24595	0.73	-1.3
5,338,281	+		PS417_24595	0.73	-0.7
5,338,281	+		PS417_24595	0.73	+0.7
5,338,281	+		PS417_24595	0.73	-0.2
5,338,281	+		PS417_24595	0.73	-0.3
5,338,281	+		PS417_24595	0.73	-0.1
5,338,281	+		PS417_24595	0.73	-0.5
5,338,281	+		PS417_24595	0.73	-0.0
5,338,281	+		PS417_24595	0.73	+0.1
5,338,281	+		PS417_24595	0.73	-1.2
5,338,281	+		PS417_24595	0.73	-0.2
5,338,281	+		PS417_24595	0.73	+0.5
5,338,282	-		PS417_24595	0.73	-0.4
5,338,282	-		PS417_24595	0.73	-0.0
5,338,282	-		PS417_24595	0.73	+0.0
5,338,282	-		PS417_24595	0.73	-0.6
5,338,282	-		PS417_24595	0.73	+0.3
5,338,282	-		PS417_24595	0.73	-1.3
5,338,282	-		PS417_24595	0.73	+0.0
5,338,284	+		PS417_24595	0.73	+0.2
5,338,291	-		PS417_24595	0.73	-1.0
5,338,291	-		PS417_24595	0.73	+0.3
5,338,314	+		PS417_24595	0.74	-1.3
5,338,314	+		PS417_24595	0.74	-0.6
5,338,314	+		PS417_24595	0.74	-0.1
5,338,314	+		PS417_24595	0.74	-0.5
5,338,314	+		PS417_24595	0.74	+0.5
5,338,314	+		PS417_24595	0.74	+0.1
5,338,315	-		PS417_24595	0.74	-0.1
5,338,315	-		PS417_24595	0.74	+0.7
5,338,315	-		PS417_24595	0.74	+1.0
5,338,315	-		PS417_24595	0.74	+0.3
5,338,357	-		PS417_24595	0.76	+0.0
5,338,357	-		PS417_24595	0.76	+1.3
5,338,357	-		PS417_24595	0.76	+0.1
5,338,374	+		PS417_24595	0.77	-0.7
5,338,374	+		PS417_24595	0.77	+0.2
5,338,375	-		PS417_24595	0.77	+0.4
5,338,375	-		PS417_24595	0.77	+0.1
5,338,375	-		PS417_24595	0.77	+0.4
5,338,375	-		PS417_24595	0.77	+1.3
5,338,464	+		PS417_24595	0.81	+0.0
5,338,509	+		PS417_24595	0.83	+0.1
5,338,599	+		PS417_24595	0.86	-0.7
5,338,600	-		PS417_24595	0.86	-1.0
5,338,600	-		PS417_24595	0.86	-0.0
5,338,677	+		PS417_24595	0.90	+0.2
5,338,678	-		PS417_24595	0.90	+0.2
5,338,924	+				-0.7
5,338,924	+				+0.2
5,338,987	+				+0.6
5,338,988	-				+0.4
5,338,988	-				-0.1
5,338,999	-				+0.1
5,339,023	+				+0.8
5,339,023	+				+0.2
5,339,023	+				-0.1
5,339,024	-				+0.9
5,339,029	-				-1.7
5,339,029	-				-0.4
5,339,029	-				-0.2
5,339,078	+				-0.3
5,339,207	+				+0.4
5,339,208	-				-3.7
5,339,211	+				-0.4
5,339,211	+				+0.1
5,339,211	+				-1.1
5,339,211	+				+0.1
5,339,212	-				-0.1
5,339,212	-				+0.0
5,339,212	-				+0.0
5,339,212	-				+0.0
5,339,374	+		PS417_24600	0.22	-1.3
5,339,703	+		PS417_24600	0.63	-0.4
5,339,703	+		PS417_24600	0.63	-1.0
5,339,703	+		PS417_24600	0.63	-0.9
5,339,820	+		PS417_24600	0.77	-0.6
5,339,913	+		PS417_24600	0.89	-0.6
5,339,913	+		PS417_24600	0.89	-0.6
5,339,913	+		PS417_24600	0.89	+1.0
5,339,914	-		PS417_24600	0.89	-0.5
5,340,003	+				+1.4
5,340,003	+				-0.6
5,340,081	+		PS417_24605	0.10	-1.0
5,340,197	+		PS417_24605	0.29	-0.8
5,340,384	+		PS417_24605	0.59	-1.1
5,340,384	+		PS417_24605	0.59	-0.4
5,340,384	+		PS417_24605	0.59	-0.2