Strain Fitness in Pseudomonas simiae WCS417 around PS417_24225

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
5,253,771	+		PS417_24220	0.56	+0.1
5,253,771	+		PS417_24220	0.56	-0.5
5,253,924	+		PS417_24220	0.64	+0.3
5,254,053	-		PS417_24220	0.71	-0.5
5,254,203	+		PS417_24220	0.79	-0.4
5,254,203	+		PS417_24220	0.79	-1.9
5,254,203	+		PS417_24220	0.79	-0.5
5,254,203	+		PS417_24220	0.79	-0.4
5,254,203	+		PS417_24220	0.79	-0.1
5,254,203	+		PS417_24220	0.79	+0.2
5,254,203	+		PS417_24220	0.79	-0.6
5,254,203	+		PS417_24220	0.79	+2.5
5,254,204	-		PS417_24220	0.79	+1.6
5,254,380	+		PS417_24220	0.89	-0.1
5,254,380	+		PS417_24220	0.89	-0.5
5,254,404	+				+0.0
5,254,404	+				+0.2
5,254,404	+				-0.0
5,254,404	+				-0.0
5,254,405	-				-0.2
5,254,405	-				-0.3
5,254,446	+				+0.6
5,254,473	+				-0.3
5,254,474	-				+0.0
5,254,474	-				-0.9
5,254,474	-				+0.3
5,254,474	-				+0.5
5,254,479	+				-0.0
5,254,480	-				-0.3
5,254,663	+		PS417_24225	0.27	-1.6
5,254,664	-		PS417_24225	0.27	-0.3
5,255,279	+				-0.5
5,255,279	+				-1.3
5,255,279	+				+0.3
5,255,571	-		PS417_24230	0.21	-0.7
5,255,625	-		PS417_24230	0.23	+0.7
5,255,625	-		PS417_24230	0.23	-1.7