Strain Fitness in Pseudomonas simiae WCS417 around PS417_02415
Experiment: Vogels_fungal_media; pH 5.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Vogels_fungal_media; pH 5.5 |
---|---|---|---|---|---|
remove | |||||
553,320 | - | +1.2 | |||
553,595 | - | PS417_02415 | 0.15 | -2.2 | |
553,622 | + | PS417_02415 | 0.17 | -2.5 | |
553,622 | + | PS417_02415 | 0.17 | -1.7 | |
553,623 | - | PS417_02415 | 0.17 | -0.6 | |
553,766 | + | PS417_02415 | 0.29 | -2.2 | |
554,316 | + | PS417_02415 | 0.74 | -0.2 | |
554,317 | - | PS417_02415 | 0.74 | -2.2 | |
554,707 | - | -0.0 | |||
554,759 | + | +0.9 | |||
554,760 | - | +0.8 | |||
554,760 | - | +0.6 | |||
555,622 | - | -0.3 |
Or see this region's nucleotide sequence