Strain Fitness in Pseudomonas simiae WCS417 around PS417_23910

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
5,173,762	+				-0.7
5,174,398	+				-1.9
5,174,398	+				-0.8
5,174,399	-				+0.5
5,174,400	+				+0.5
5,174,450	+				+1.4
5,174,450	+				+0.6
5,174,450	+				-0.7
5,174,451	-				-0.1
5,174,451	-				+0.1
5,174,451	-				-0.3
5,174,452	+				+0.4
5,174,453	-				+0.5
5,174,453	-				+0.2
5,174,453	-				+0.3
5,174,453	-				-0.1
5,174,453	-				-0.0
5,174,481	+				+0.2
5,174,483	+				+0.1
5,174,997	+		PS417_23910	0.57	-2.5
5,174,997	+		PS417_23910	0.57	-1.7
5,174,997	+		PS417_23910	0.57	-1.0
5,174,997	+		PS417_23910	0.57	-3.4
5,174,998	-		PS417_23910	0.57	-1.8
5,174,998	-		PS417_23910	0.57	-1.1
5,174,998	-		PS417_23910	0.57	-0.9
5,174,998	-		PS417_23910	0.57	-2.7
5,175,115	+		PS417_23910	0.71	+0.9
5,175,183	+		PS417_23910	0.80	+0.1
5,175,284	+				-1.5
5,175,550	+		PS417_23915	0.25	-2.9
5,175,634	+		PS417_23915	0.35	-2.2
5,175,797	-		PS417_23915	0.54	-3.5
5,175,872	+		PS417_23915	0.62	-1.9
5,176,223	+				+2.1
5,176,276	+				-0.0
5,176,276	+				-0.3
5,176,288	-				-0.0
5,176,288	-				-1.0
5,176,298	+				-1.1