Strain Fitness in Pseudomonas simiae WCS417 around PS417_21700

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,706,364	-		PS417_21695	0.45	+0.6
4,706,387	-		PS417_21695	0.46	-0.5
4,706,595	+		PS417_21695	0.60	+0.1
4,706,840	-		PS417_21695	0.77	-0.5
4,707,163	+				-0.3
4,707,164	-				-1.3
4,707,164	-				+0.5
4,707,463	-		PS417_21700	0.28	-0.8
4,707,631	-		PS417_21700	0.44	-0.7
4,707,901	+		PS417_21700	0.71	-2.3
4,707,901	+		PS417_21700	0.71	+0.8
4,707,902	-		PS417_21700	0.71	-0.6
4,707,948	+		PS417_21700	0.75	-1.1
4,708,205	-				-0.2
4,708,345	-				-1.7
4,708,524	+		PS417_21705	0.27	-1.5
4,708,525	-		PS417_21705	0.27	-1.8
4,708,633	-		PS417_21705	0.37	-1.1
4,708,633	-		PS417_21705	0.37	-1.1
4,708,633	-		PS417_21705	0.37	-1.3
4,708,633	-		PS417_21705	0.37	-1.3
4,708,633	-		PS417_21705	0.37	+0.5
4,708,708	-		PS417_21705	0.45	-1.5
4,709,010	+		PS417_21705	0.74	-0.3
4,709,011	-		PS417_21705	0.74	-0.5